Carya illinoinensis (pecan): 122304222
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Entry
122304222 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122304222
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122304222
Membrane trafficking [BR:
cill04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122304222
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
FYVE_2
Motif
Other DBs
NCBI-GeneID:
122304222
NCBI-ProteinID:
XP_042972274
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Position
3:complement(39929435..39933700)
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AA seq
477 aa
AA seq
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MANFDARVSYSSLSNIEKDNSRFHYEDDYSDSPWSVPQAPSGSKSSKQEYSYHFPIESDE
FLDGGYDSSDDTRNSMPTNFPPEVNLKNVLSGMFAILTGQNKSVPRLTSNQQLPSSDVSF
LESGKNGNTFLHSSVYIPSAPPLLEPSGVNYSAYKEVLEAEPPEWLPDSSSTVCMQCTAP
FTALTRGRHHCRFCGGVFCRACTKGRCLLPVRFRERNPQRVCDACYDRLDPLQGIFVNSI
SNAVQVAKHDVIDWTCTRGWLNLPLGWSMEHEIYKASNTLRSYCQVARLNPDRSIPLAVL
KGAKGLAILTVAKAGVLVTYKLGTGLVISRRSDGSWSAPSAIFSMGLGWGAQIGGELMDF
LIVLHDLKAVKTFCSRMHFSLGAGCSAAAGPVGRVLEADLRAGDRGSGMCYTYSCSKGAF
VGVSLEGNIVATRMDTNLRFYGDPYLSTSDILLGTVDRPKAAEPLYASLEDLFSCVR
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactttgacgcaagagtttcgtattcttcactctctaatatagaaaaagacaat
tccagattccactatgaagatgactacagtgattctccatggtctgtgccacaagcccca
tcaggctcaaaatcctctaaacaagaatactcataccatttcccaattgaatccgatgaa
tttcttgatggaggatatgattcaagtgatgatactcgaaattctatgccaactaacttt
ccgcctgaggtgaacttaaagaatgtgctcagtggcatgtttgccattttaactggccag
aacaaatcggttccaagactcacctcaaatcagcaacttcccagttcggatgtttcgttt
cttgagtctggaaagaatggaaataccttccttcattcctctgtttacatacccagtgcc
ccaccactcctcgagcctagtggagttaattatagcgcgtacaaagaggtcttggaggcc
gagccccccgagtggttgccagatagttctagtacagtttgtatgcagtgcactgctcct
ttcacggcactgactcgtggaagacatcattgtcggttttgtggaggggttttctgcaga
gcttgtactaaggggaggtgcttgttacctgttagattcagggagagaaatccgcagagg
gtctgtgatgcctgctatgataggctcgatcctttgcagggtatttttgtgaactctata
agcaatgctgtgcaagtagcaaagcatgatgtcatcgattggacatgcacaagaggatgg
ttgaatcttcctcttggttggtccatggaacatgagatatacaaagcctccaatacatta
agaagctactgccaggttgctaggttgaatcctgataggtccatacccttagcagttttg
aaaggagcaaaaggcctggcaattttaactgttgctaaagctggtgttctagttacttac
aaacttggcacaggtttggtcatttctcgaaggtcagatggatcatggtctgcaccgtca
gccatattctccatgggcttaggatggggtgctcagattgggggtgagctcatggacttc
ttaatagtgcttcacgatttgaaagctgtgaagaccttttgtagtcggatgcatttctct
cttggtgccggttgtagtgctgcagcaggacctgttgggagagtgctggaagcagatctt
cgtgctggagataggggttctggcatgtgctacacttacagttgtagcaaaggcgcattt
gtgggagtgtccttggaagggaatattgttgcaacaaggatggacaccaacttgcgcttc
tatggcgatccttatctcagcacgtctgatattctacttggaacggtggacagaccaaag
gctgctgagcccttgtatgcctcccttgaagacctcttttcctgtgtacggtga
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