Carya illinoinensis (pecan): 122304246
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Entry
122304246 CDS
T08745
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122304246
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
90S particles
Other 90S particles
122304246
Pre-60S particles
Other pre-60S particles
122304246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
HEAT_GCN1
MMS19_N
ARM_TBCD
Motif
Other DBs
NCBI-GeneID:
122304246
NCBI-ProteinID:
XP_042972330
LinkDB
All DBs
Position
3:41227566..41240319
Genome browser
AA seq
1275 aa
AA seq
DB search
MEGMDEIEDPTFFLEETNDDLCLSILSSFSNSTKEDHQHLCSVIGAMSQELKDQNLPSSP
VAYFGAACSSLDRLAFELDPPAYVVNTLLTILHLVLPRIPPAIRKKKADFLSELLVRVLR
SPLLSVGAVISGLKCTSHLLNNRDAINWSDICHLYGVLLGFLTDSRPKVRRQSHVCLRDS
LSRFQETSVLAPACEGITKIFEKSLLMAGGSNVNATEGPKGAQEILYILDALKECLPLMS
IKYTTSILKYYKSLLELHQPLVTRRITDSLYLLCLVPALAVSPEALLDLLDSISLSVSTN
ETSADSMTFAARLLDVGMCKMYSLNRQLCVTKLPVVFNTLKDILASEHEEAVYAATNALK
NVTGACIDESLIKQGVDQILTNANNDARRSGPTIIEKVCATIESLLGYHYAAVWDMSFQV
VSMMFDKLGNHSSYFLKEVLSNLADMQELPDEDFPFRKQLHECLGTALGALGPEMFLDLV
PLNLEAEDLSEANVWLFPILKQYTVGARLSFFTESVWGMIGLMKQKSQKLELQGRVFSSR
SANALVYSLWSLLPSFCNYPLDTADSFKHLKKALWDALNEEPDTHGIICTSLQILIQQNK
KISEEKSEMPNIEEGMARQRALAHYTPQIAADNLHALKSSAREALTILSNVLMQSTKDNG
GSLQSTIGEFASISDKEVVSRFFLNTVQKLLKVTQEAGKPGNSRTSNSIPTNPLTNDSSP
SLLRARFFDLAVSLLPGLSAKEIDVLFLAIKPALKDADGLIQKKAYKVLSVILRNCDGFL
ISNLEELLGLMIDVLPSCHFSSKRHRLDCLYFLTVHVPKDDSNQRQHIIGSFLTEIILAL
KEANKKTRNRAYEILVQIGHACGDEEKGGNRENLYQFFSMVAGGLASETPHMVSAAVKGL
ARLAYEFSDLVSTACGLLPSTFLLLRRKNKEIIKANLGLLKVLVTKSQPEGLQMHLGSMV
EGLFKWQDNTKNHFKAKVKHLLEILVKKCGLEAVKAVMPEEHMKLLTNIRKINERKERNL
RTKSEARSQLSKATTSRLSRWNHTKIFSDFGDDETEGSDTEHMEAMTISGQQRKGSSQLK
SKASSLRSRSRAAMNLPEHLFDQFKDEPLDLLDRRKTISALRSSKHVKRKLDSDEPELDS
EGRLIIREGENSKETSSDPDLDAKSEAGSHMSLNSRENQKRRKTSVSGWAYTGREYTSKK
AGGDVKRKNKLEPYAYWPLDRKMMSRRPEHRAAARKGMASVMKMTKKLEGKSASSLLSIK
GLKFKRSQKKKGSKK
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcatggacgaaattgaggatcccacgtttttccttgaagaaaccaatgacgac
ttgtgcctttcgatcctctctagcttcagcaactccaccaaagaggaccatcagcacctc
tgctcagtcataggcgccatgtcgcaagagctcaaggaccagaaccttccttccagccca
gtagcgtacttcggggctgcgtgctcctcccttgaccgcctcgccttcgagcttgatcca
cctgcttacgttgtcaacaccctcctcacaatcctccacctggttcttccccgaataccc
cctgccattcgtaaaaagaaggctgatttcttgtccgaactattggtgcgggttcttcgg
tctccgttgttgtctgtcggagccgtgatatctggattgaaatgcacttctcatttgtta
aacaaccgagatgctatcaactggtctgacatttgtcacttgtatggcgttcttttgggt
ttcctcacggattcccgtcccaaggtgagaaggcaatcacacgtgtgtcttcgagattcc
ttatcaagatttcaagaaacatcagtgctagcacctgcatgtgaagggattacaaaaata
tttgaaaaatctcttcttatggctggtggatcaaatgtgaatgccactgaaggacccaag
ggagctcaagagatcctttatattttggatgctttgaaggagtgccttcctcttatgtca
attaagtacacaacaagcatcctcaaatactacaaaagtttactggagctgcaccaaccc
ctcgttacaaggcggataacagatagtttgtatttactttgtcttgtcccggctttagct
gtttctcctgaggcattgcttgatttgttagactcaatatctctatccgtctccacaaat
gagacatctgctgattcgatgacatttgctgcacgcttgcttgatgttggaatgtgtaaa
atgtattccctcaataggcaactatgtgtaacgaagctgcccgttgtattcaacacactc
aaagatattttggcatctgaacatgaggaggctgtatatgcagccacgaatgcattgaag
aatgtgacgggtgcttgcattgatgaaagcttgatcaaacagggtgtggaccagattttg
acgaatgcaaacaatgatgctaggcggtctggccctaccatcattgaaaaagtgtgtgca
actattgaaagcttgcttggttatcactatgctgctgtctgggacatgtcatttcaagtt
gtctctatgatgtttgacaaattagggaatcattcttcttattttttgaaggaggtcctt
agcaacttggctgatatgcaggagttgcctgatgaagattttcctttcagaaaacagctg
catgaatgccttggaacagctcttggtgcattaggacctgaaatgttcttggacctcgta
cctcttaatttggaagctgaagatctgtctgaggcaaatgtttggctctttccaattctg
aagcagtatactgtcggtgcccgtctaagcttttttacggagtcagtttggggtatgatt
ggactgatgaaacagaaatctcaaaagcttgaacttcaaggacgggttttttcatctagg
agtgctaatgcactcgtgtactctttgtggtccttactgccttcattttgcaactatcct
ttggatactgctgacagtttcaaacatctaaagaaagctttatgggatgcacttaatgaa
gaacctgatacgcatggaataatatgcaccagtttgcagatacttattcagcagaataag
aaaatttcagaggaaaaaagtgagatgcctaatattgaagaaggtatggccagacaacga
gcactggcccattataccccacagattgcagcagataatttacatgcacttaagtcatct
gcacgtgaggccttaaccattttgtcaaatgttctcatgcaatctacaaaagataatggt
ggttctttgcagtccacaattggtgaatttgcttccatatcagataaggaagtagtgtca
agattctttttgaatacagtgcagaagcttttgaaggtcactcaagaggctggcaaacca
ggaaattcaagaacttctaattctatacctacgaaccctctaacaaacgatagttctcca
tcacttttgagggcgcggttttttgatttggcagtttcacttttgcctggtttgagtgct
aaagagattgatgttttatttcttgcaataaagcctgcattgaaggatgccgatggtctg
atacaaaagaaggcatacaaagttctttcagttattctgaggaattgtgatgggtttctc
atatcaaaccttgaggaattgcttgggttaatgattgatgtgctgccttcatgccatttt
tcttccaaacgtcacagacttgattgcttgtactttctaacagtccacgttcccaaggat
gattcaaaccagaggcaacacatcattggctccttcctaacagaaataatacttgcgctt
aaagaggcaaataagaaaacaagaaatagagcatatgaaattcttgttcaaattggccat
gcttgtggagatgaagagaaaggcggaaatagagaaaacttgtatcaattttttagcatg
gtggctggaggactggccagcgagacacctcacatggtcagtgctgcagtcaaaggctta
gctcgcttggcttatgagttttctgatctagtttctactgcttgcggtttacttccatcc
acttttctcctccttcggagaaagaataaagaaataatcaaggctaatttaggtttgttg
aaggtgttggtgacaaaatcacaacctgaaggtctgcaaatgcacttggggagcatggtg
gaaggattgttcaagtggcaagataacaccaaaaaccacttcaaggctaaggttaagcat
ctccttgaaattcttgtcaagaagtgcggtctggaagcggtgaaggctgtgatgcctgag
gaacacatgaaactccttactaatatacggaagatcaatgaacgaaaagagagaaaccta
aggactaaatcagaagcaagatctcaactgtcaaaagcaactacttccaggctaagcaga
tggaatcacacaaaaatattttctgattttggtgatgatgaaactgaaggaagtgatact
gagcatatggaagccatgacaatatctggtcaacagcgcaagggttcctcacagctgaag
tccaaagcatcttcattacgctccaggagtagagcagctatgaacttgcctgagcaccta
tttgatcaattcaaagatgagccacttgacttgcttgataggcggaaaacaatctcagct
cttcgatcttctaagcatgtcaagcggaaactagattcagatgaaccagaactggactct
gaagggcgcttgatcattcgtgagggagaaaactcaaaggagacatcctctgaccctgat
ttggatgcaaagagtgaagcaggtagtcacatgtcattgaactcaagggaaaaccagaag
cgtaggaaaacatctgtgtccggttgggcttacacgggtagggagtataccagcaagaag
gcaggtggggatgtgaagagaaagaataagcttgaaccatatgcatattggccacttgat
cgcaaaatgatgagccgtagacctgagcatcgggctgctgcaaggaaagggatggcaagt
gtgatgaagatgacaaaaaagcttgaaggcaagagtgcctcaagtttactttccattaag
ggcctgaagtttaaaaggagtcaaaagaaaaagggcagcaaaaaataa
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