Carya illinoinensis (pecan): 122304317
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Entry
122304317 CDS
T08745
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122304317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122304317
04131 Membrane trafficking [BR:
cill04131
]
122304317
03029 Mitochondrial biogenesis [BR:
cill03029
]
122304317
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cill04812
]
122304317
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122304317
mRNA cycle factors
P-body specific factors
122304317
Membrane trafficking [BR:
cill04131
]
Others
Actin-binding proteins
Myosins
122304317
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122304317
Cytoskeleton proteins [BR:
cill04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122304317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
TMF_DNA_bd
TSC22
AAA_16
DUF1664
AAA_22
nSTAND3
Laminin_II
COG6_N
GAS
TRPM_tetra
NPV_P10
Motif
Other DBs
NCBI-GeneID:
122304317
NCBI-ProteinID:
XP_042972444
LinkDB
All DBs
Position
3:complement(43874465..43898819)
Genome browser
AA seq
1531 aa
AA seq
DB search
MAGPDNIIVGSHVWAEDPSLAWIDGEVFRINGEEVRVQTTNGKTVVTNISKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGAAFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEDREKYKLGNPKSFHYLNQSTCFELDGVDDGEEYH
ATRRAMDIVGISEEEQEAIFKVVAAILHLGNIEFAKGEEIDSSVVKDKQSRHHLNVTAEL
LECDAKSLEDALIKRVMVTPEEVITRTLDPVAALGSRDALAKTIYSRLFDWIVDKINNSI
GQDPNSKSLIGVLDIYGFESFKQNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTSFTISHYAGEVNYLADLFLDKNKDYVVAEHQDLLTASKCSFVASLFPPLPEESSKSS
KFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNVIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLHRFGVLAPEVLDGNYDEKVACQMIMDKKGLKGYQIGKTKVFLR
AGQMAELDARRAEVLGNAARIIQRQSRTYIARREFLEIRKAAIQLQSCLRGILARKLYEQ
LRREAAALMMQKNFRRYNVRKSYLKVRLSAITLQTGLRAMTARNEFRFRKQTKAAIIVQA
HLRGHIAYSYYKNLQKATLVTQCGWRRRVARRELRKLKMAARETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKVQEIAKLQDALHSMQKQVEEANARVIQEREAARKAIEEAPP
VVKETPVIIQDMEKIGHLTAEVESLKALLLSERQTAEEARKARTDSEARNAELAKKLEDA
EQKVDQLQESVQRLEDKLSNLESENQVLRQQALTLSPTGKPLSTRPKTMIIQRTPENGNV
LNGEAKVASDMTHAVSNARGPESEEKPQKSLNEKQQDNQELLIKCISQDLGFSGAKPVAA
CVIYKCLLHWRSFEVERTSVFDRIIQTIASALEVPDNNDVLAYWLSNTSTLLFLLQHTLK
ASGAASLTPQRRRTATASLFGRVSQGLRSSPQSAGLSSFLSSRGLGRLDDLRQVEAKYPA
LLFKQQLTAFLEKIYGMIRDSLKKEISPLLGLCIQAPRTSRASLVKGRSQANAVAQQALI
AHWQSIVKSLNNFLQLMKANYVPPFLVRKVFTQTFSFINVQLFNSLLLRRECCSFSNGEY
VKAGLAELEQWCYGATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSI
QQLYRISTMYWDDKYGTHSVSADVISSMRVMMTEDSSNAVSSSFLLDDDSSIPFSVDDIS
KSIQQVDIADIDPPPLIRENSGFGFLLSRAE
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccagataacatcattgtaggttctcatgtgtgggctgaagatccctcactg
gcatggattgatggcgaagtcttccgaattaatggtgaagaagttcgtgtgcagactaca
aatgggaaaactgttgttacaaatatctcaaaagtgtttcccaaggataccgaagctcct
cctggaggtgtagatgacatgacaaagctttcttatttgcatgaacctggagttctgcat
aacttggcaactcgatatgaacttaatgaaatttacacatacactggaaacatcctgatt
gctgtaaatcctttccaaagattgccacatttatatgatactcacatgatggaacaatat
aaaggagctgcatttggagagctaagtcctcatgttttcgcagttgcagatgttgcatac
agggcaatgatcaatgagggaaagagcaactcaattctggttagtggagagagtggtgct
ggtaagacagagacaacaaagatgcttatgcgatatcttgcttaccttgggggtcgatct
ggagtagaagggcggacagttgaacaacaagttctagaatcaaatccagttcttgaagca
tttggcaatgccaaaactgtcagaaacaacaactcaagtcgttttggtaagtttgttgag
atccagtttgacaagagtgggaggatatctggggctgctgtacgaacttacttgctcgaa
aggtctcgtgtttgccaaatttcaaatcctgaaagaaactaccactgcttttaccttctt
tgtgcagcaccacctgaggatagagagaagtataagttgggaaaccctaaatcgttccat
tacttaaatcaatccacctgttttgagctggatggggtagatgatggagaagagtatcat
gccaccagaagggctatggatatagttggaatcagtgaggaagagcaggaggcaattttt
aaggttgtagctgcaattctgcatcttggaaatattgaatttgcaaagggagaagagatc
gactcttctgttgttaaggataagcagtctagacaccatcttaatgtgacagccgaactg
cttgagtgtgatgccaagagcttggaagatgccctgattaagcgtgtaatggtgacacca
gaagaggttattacaagaactcttgatcctgttgctgcattgggtagcagggatgcatta
gctaaaaccatctactctcgtttgtttgattggattgtggacaaaatcaacaactcaatt
gggcaagatccaaactcaaaatccttaattggagttcttgatatttatgggttcgagagt
tttaagcaaaatagttttgagcagttctgtatcaactttacaaatgagaaactgcaacaa
catttcaatcagcatgtcttcaaaatggaacaagaagaatatacgaaagaagaaatcaat
tggagttacatagagtttgttgataatcaagatgttttggatttgattgagaagaaacct
ggaggaattattgcacttctggatgaagcctgcatgtttcctaaatccacacatgaaaca
tttgctcagaagttgtaccaaacattcaaaaacaataagcggtttatcaagcctaagctg
tctcgtactagttttactatttctcactatgcaggagaggtaaattatctagctgatctg
ttccttgataaaaacaaagattatgtggtggctgaacatcaggatctgttgactgcttca
aagtgctcttttgtggcaagtctatttcctccacttccagaagaatcatcaaagtcatcc
aagttttcttccattggctctcgctttaagttacaacttcaatctttgatggagaccttg
agttcgaccgaacctcattacatcagatgtgtgaagccaaacaatgtcctcaagcctgct
atctttgagaacctgaatgttatccaacaattacgctgtggtggtgttcttgaggcaatc
agaatcagctgtgctgggtatcctacgcgacgaacattttatgagtttcttcaccgcttt
ggtgttcttgctcctgaagttttggatggaaactatgacgagaaagttgcatgtcagatg
attatggataaaaaaggattgaaaggttatcagattggcaagacaaaagttttcttgcga
gctggtcagatggctgagttggatgcaagaagagcagaggtgcttggaaatgcggctaga
atcattcaaagacaaagtcgtacatatattgcacggagggagttcctcgaaatacgtaaa
gctgcgattcaattgcagtcatgtttgcgaggtatattggctcggaaactctatgagcaa
ttacgtcgagaagcagcagctttgatgatgcagaagaatttccgaagatacaatgtcaga
aaatcttacttaaaagttcggttgtctgcaatcacattgcaaacagggttaagggcaatg
actgctcgcaatgaattcagattcagaaaacaaactaaggctgcaattattgtccaggct
catttgcgtggccacatagcatattcttattataagaatctccagaaggccacactagtt
actcagtgtggttggaggcgaagggttgcacggagagagctcaggaagctcaaaatggct
gcaagagaaactggggcccttaaagaagcaaaagacaaattagaaaagcgtgtggaagaa
cttacatggcgtttgcagcttgagaagagattaaggactgatttggaagaggaaaaagtc
caggaaattgcgaagttacaggatgctttgcattcaatgcaaaaacaagtagaagaagca
aatgcaagggttatccaagaacgagaagctgctcggaaagctattgaagaagctcctcca
gtcgttaaggagactcctgttataatccaagatatggaaaagattggtcatttaactgct
gaggtggagagtttaaaggctttgctactatctgaaaggcagacagcagaggaagccagg
aaagctcgcacagattctgaggctagaaatgcagagctggccaaaaaacttgaagatgca
gaacaaaaagtggatcagcttcaggaatctgtgcagaggttagaagacaaactatccaat
ttagagtccgagaatcaagtacttcgacagcaggcactgaccttgtcaccaactggcaaa
cctttgtctacgagaccaaagactatgattattcagagaacaccagagaatgggaatgtt
ctaaatggagaagccaaggttgcatcagatatgactcatgctgtttcaaatgcacgcggg
cctgaatcagaggagaaaccacagaaatctcttaacgagaagcaacaggataaccaggag
cttctgattaaatgcatctctcaagatttgggattttctggggccaaaccagttgctgct
tgtgtcatatacaaatgccttcttcactggaggtcatttgaagttgaaagaactagtgtt
tttgatcgtatcattcaaacaatagcttcagccttggaggtcccagataataatgatgta
ttagcttattggttatctaatacatcaactttattgtttctgctccaacacacgctcaaa
gcaagtggagcagctagtttgactccacagcggcggagaactgcaacagcttctcttttt
ggaagggtgtctcaagggttacggtcatctcctcaaagtgcagggctctcatcatttctt
agtagtcgagggcttggtagacttgatgacttgcggcaagttgaggcgaagtatccagca
ttattgtttaagcagcagcttactgccttccttgagaagatttatggaatgataagggac
agtctaaagaaagagatctctccattacttggattatgtatccaggcacccaggacatca
cgggcaagtttagtgaaagggcgttcccaagctaatgctgttgctcagcaagctttaatt
gcacattggcaaagcattgttaaaagcttaaacaactttttgcagttgatgaaagcaaac
tatgtgcccccattcttagtccgtaaagtgttcactcagacattctctttcatcaatgtt
cagctattcaacagtcttcttctgcggcgtgagtgttgttcattcagtaatggggagtat
gtaaaagcgggtctggctgaactagaacagtggtgttacggggctactgaggaatatgca
ggctcagcttgggatgaactgaagcatattaggcaggctgttggattcctagttatacat
caaaagccgaagaagactttgaatgaaataacaaaggagctttgtcctgtgctcagcata
caacagttatacaggatcagtacaatgtattgggatgacaaatatggcacacatagtgtg
tctgctgatgttatttcaagcatgagagttatgatgactgaggactctagcaatgctgtt
agtagttccttcctattagatgatgactcaagtatcccgttctctgtggatgacatctcc
aagtcaattcaacaagtagatatagcagacatcgatcctcctcccttaattcgtgaaaac
tcgggatttggatttttactttcacgtgcagagtga
DBGET
integrated database retrieval system
