Carya illinoinensis (pecan): 122304342
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Entry
122304342 CDS
T08745
Name
(RefSeq) heat shock factor protein HSF30-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122304342
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122304342
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
122304342
NCBI-ProteinID:
XP_042972494
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Position
3:complement(44305669..44307967)
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AA seq
493 aa
AA seq
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MVTESNGGHTFSSLPKKEQVGVEEEEETRTTPSDNIPTNSGGAPDGGSSSTAIRTPVHDI
NDTAPPTRTKASEVGDIEVVCIKEEEDEEEEEDPDVASFDGDGGGNYGPSSSYSSAAVPK
PMEGLHEPGPTPFLKKIFEMVEDPDTDTVVSWSKTRDSFTVWDEHVFAQDLLPRYFKHRN
FSSFIRQLNTYGFKKIDTDNWKFANEGFQGGKKHLLKSIKRRSRLNKHQQQQEGAVGVNP
KKPGLKAELESLREDQNVLKVEILNLRQQQHDSQNHLGVVKNRIRGAECRLQQTLFFLTK
VTKSPSFAQQLIQKTKQQKRELGGGEFVKRRRLLASHGREKAIDNSHSINCRNHVQGDLV
TTLSLLSEILEEAVNMDTTHPIQTPFPAPIYDALCSLEDQNVNVMYKRSSSPNISSAYDV
MSENLPEDNLIVDEELDMNDSKFYSELEDLIVKQHDLGGLVEQAGCIGGDHFRLNEHKQV
ARVCKNEAEGRES
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggtcactgaaagtaacggtggtcatactttctcatcattgccaaagaaagaacaagtc
ggtgtcgaagaagaagaagaaacaagaacgacgccatctgataacattcctactaattcc
ggcggtgcacctgacggggggtcgtcctccaccgcaataaggacaccggtccatgatata
aacgacaccgctccaccgactagaaccaaggcctcggaagtgggcgacatcgaggtggtc
tgtataaaagaagaagaagacgaagaggaggaagaggacccggatgtagcgagttttgac
ggtgacggaggtggtaattatgggccttcgtcgtcgtactcgtcggcggcggtgccaaag
ccgatggaggggctgcacgaaccgggtccaacgccgtttctaaagaagatattcgagatg
gtggaagacccggataccgatacggtggtttcgtggagcaagacccgggacagcttcacc
gtgtgggacgagcatgtcttcgcacaagacctgctaccaaggtatttcaagcacagaaac
ttctccagcttcattcggcagctcaacacctacggtttcaagaagattgatacagataac
tggaagtttgcaaacgaaggatttcaaggagggaagaagcatttgctcaagagcatcaaa
agaagaagtcggttaaacaaacatcaacaacaacaagaaggggcggtaggtgtcaatccg
aagaaacccgggttaaaagctgaacttgagagtctgagagaggatcaaaacgtactgaaa
gtggaaattctgaaccttagacagcaacagcatgactctcagaatcatttaggtgttgtc
aaaaaccggattcgaggtgcagagtgtaggttacaacagacgctctttttcctaaccaaa
gtaactaaaagcccaagttttgctcagcaattaatccagaagacaaagcagcaaaagaga
gagctgggcggaggtgaatttgtcaagagacgcagactgctagcatcccatgggcgtgaa
aaggctattgacaacagccatagcattaattgcagaaaccatgttcagggggacttggtg
acaactctatctttactctctgaaatcctggaagaagctgtgaatatggatactacccat
ccaatacaaacaccatttccagctcccatatatgatgcattgtgcagtcttgaggatcag
aatgtcaatgtgatgtataaaagaagtagcagcccaaatatctcatctgcttatgatgtc
atgtcagagaatttaccggaggataatttgattgtagatgaagagttagatatgaatgac
tctaaattctattctgaattggaggatttgattgtcaagcaacatgatttgggtggattg
gtggagcaagctggttgtattgggggggatcacttcagattaaatgaacataagcaggtt
gccagagtatgcaaaaatgaagctgaaggtagagaaagctag
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