Carya illinoinensis (pecan): 122304356
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Entry
122304356 CDS
T08745
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03082
ATP-dependent chromatin remodeling
cill03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122304356
03083 Polycomb repressive complex
122304356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122304356
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122304356
Histone modification proteins
HAT complexes
HATB complex
122304356
HDAC complexes
Sin3A-HDAC complex
122304356
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
122304356
PRC2.2
122304356
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
122304356
Heterochromatin formation proteins
Other heterochromatin formation proteins
122304356
Chromatin remodeling factors
NuRD complex
122304356
NuRF complex
122304356
NuRF complex (fruit fly)
122304356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_SPT8
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122304356
NCBI-ProteinID:
XP_042972518
LinkDB
All DBs
Position
3:complement(44713987..44726489)
Genome browser
AA seq
495 aa
AA seq
DB search
MESQPQVVKKKETRGRKPKPKDDKKEESGKVKEAKKSQQPTVDDKYTQWKSLVPVLYDWL
ANHNLVWPSLSCRWGPQLEKATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEH
ISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPNRHA
VLGATNSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHISATATSPGG
GGSIIKPNSKPGEGNDKAADGPSVGPRGVYLGHEDTVEDVAFCPSSAQEFCSVGDDSCLI
LWDARVGSSPVVKVEKAHNADLHCVDWNPHDDNLVLTGSADNSVRMFDRRNLTSNGVGSP
IYKFEGHRAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERAARSPSSPPGLFF
QHAGHRDKVVDFHWNAFDPWTIVSVSDDCDSTGGGGTLQIWRMSDLIYRPEEEVLAELEK
FKSHVVACASKPRES
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgcagccgcaggtagtgaagaagaaggagacgaggggccggaagccgaagccc
aaggatgataagaaagaggaatctgggaaggtgaaggaggcgaagaagtctcagcagccc
accgtcgacgacaagtacacccagtggaagtctctcgtccctgtcctctacgactggctc
gccaaccacaacctcgtctggccctctctctcttgccggtggggtcctcagctggagaaa
gcgacttacaagaatcgccagcgtctctatctctctgaacagactgatggtagtgttcca
aatactttggtcattgcaaattgtgaagttgtcaaacctagggttgcagctgccgagcac
atatcccagttcaatgaagaagcacggtcaccatttgtaaagaagtacaagaccatcata
catcctggggaggtgaacagaatcagggaactcccacagaactcaaagattgtggccact
catactgacagtcctgatgttctcatttgggatgttgaagctcaacctaaccgtcatgct
gtccttggagctaccaattctcgtccagatttgattttgactggacatcaagataatgca
gaattcgctcttgcaatgtgcccgactgaaccctatgtgctatctggagggaaggacaag
tcggtggttttgtggagtattcaggaccatatttcggcaacagccacatcaccaggaggc
gggggatcaatcattaaaccaaactctaaacctggggaaggcaatgataaagctgctgat
ggcccttctgttggaccaaggggtgtctaccttgggcatgaagatacagttgaagatgtg
gcattctgtccatccagtgcacaggagttttgtagtgttggagacgattcttgccttata
ttgtgggatgcacgagttggctccagcccagttgttaaggttgagaaggcacataatgct
gatcttcactgtgttgattggaatccccacgatgataaccttgttctaactgggtcagca
gataattctgtccgtatgtttgatcggcgaaatctcacttcaaatggagttgggtctcct
atatataaatttgagggtcacagagctgctgttctttgtgttcagtggtctccagataag
tcatctgtctttgggagctctgcagaggatggtctcttgaacatctgggattatgagaag
gttggtaaaaaggtagagcgagcagcaagaagtccaagttctcctccggggttgtttttc
cagcatgctgggcacagggacaaagttgttgacttccactggaatgcatttgatccgtgg
acaattgttagtgtgtctgatgattgtgatagtaccggaggaggagggacattgcagata
tggcgcatgagtgatttgatctaccgacctgaagaggaggttctggcagagctagagaag
ttcaagtcgcatgtggttgcttgtgcttcaaagcctcgagagtcttga
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integrated database retrieval system
