Carya illinoinensis (pecan): 122304791
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Entry
122304791 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42-like
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122304791
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122304791
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122304791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Prok-RING_4
zf-RING_16
Prok-RING_1
zf-HC5HC2H
zf-RING-like
zf-RING_4
zf-Nse
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
122304791
NCBI-ProteinID:
XP_042972990
LinkDB
All DBs
Position
3:47695317..47697296
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AA seq
426 aa
AA seq
DB search
MIRLSFLILHLQYFMFFQVKAQTSSTLDDQSQSFQPSLAVVLGILLVMFSLTILLLVYAK
FCHRRASVHGNTQHLGFIRSSSRFSGIDKTVIESLPFFRFSSLKGSKEGLECVVCLSKFE
DIEILRLLPKCKHAFHIDCIDNWLEKHASCPICRHRVSAEDPTIFTYTNSMRLMDQEEMR
GDSNIELFVQREEDRRGSSRFSLGSSFRKAGKVDKEEKSLMQEEEAGDGEEAHGVLHKHN
HKIIASDFVFKNRWSSVSSSDLMFLNSEMLNATSSNRFSSLDSNNVQSASIAGAVENEHI
VKIKEEMEMKRSFESKVSTLNKTSPVLFPGLASTSDATLKLSQTSRYMNPGERRSMSEIT
AVSRHGDSGMKNRINGESSLVGNDVKEERLRRLWFPIARGTVQWYANRERRSQHTQNTQT
AAALDV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgattcgattgagttttctcattttgcatctgcaatatttcatgttcttccaagtcaaa
gcacaaacttcctccacactagacgatcaatcacaaagttttcagcctagtcttgctgtt
gtcttgggaatcctcttagtcatgttctcattgacaatccttctccttgtctatgcaaaa
ttctgtcacaggagagcttccgttcatggcaatacacaacacttgggatttatccgatca
agctctagattttctgggatcgacaagacggtgatcgagtcacttcctttcttcagattc
tcttctcttaaggggtcaaaggaaggacttgaatgtgtagtatgcctttccaagtttgaa
gatatcgaaatcctccggttgctgccaaagtgcaagcatgcctttcacattgactgcatc
gacaattggcttgaaaagcacgcaagctgtcctatttgcaggcacagggtaagcgctgag
gacccaacaatttttacatacacaaatagcatgagattgatggaccaggaggagatgaga
ggcgactcaaacatagagctctttgtccagagagaagaagatcgtcgtgggtcttcaaga
ttcagtcttggaagtagctttcgaaaagctggaaaggttgacaaggaagagaaatctttg
atgcaagaagaagaagccggagatggtgaggaggctcatggagtcttgcataaacataat
cacaagatcattgcatctgattttgttttcaagaaccggtggagcagcgtgagttcttca
gacctgatgttcttgaattcggagatgcttaacgcaacgtcaagcaacaggttctcttct
ttggattcgaataatgttcagtcggcctccatagctggagctgtagaaaacgagcatatt
gtgaagataaaggaagagatggagatgaagagatcgtttgagagcaaggttagcacactg
aacaaaaccagtccagttttatttccaggacttgcttctacatcagatgccacattgaaa
ttaagtcagacatcaagatatatgaatccgggcgagagaagatcaatgtcagaaatcact
gctgtttcgagacatggagattcgggtatgaagaacagaatcaacggtgaatcttctttg
gttggaaatgatgtgaaagaggaaagattgaggcggctttggtttccaattgccagagga
acagttcaatggtacgccaatagagagagaagatctcaacatactcagaacacacaaacc
gctgcagcattagatgtataa
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