Carya illinoinensis (pecan): 122304794
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Entry
122304794 CDS
T08745
Name
(RefSeq) probable indole-3-acetic acid-amido synthetase GH3.1
KO
K14487
auxin responsive GH3 gene family
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122304794
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Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
PriA_C
AIG2_2
Motif
Other DBs
NCBI-GeneID:
122304794
NCBI-ProteinID:
XP_042972994
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Position
1:complement(1312684..1316163)
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AA seq
599 aa
AA seq
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MSIDSLLSSPLGPPACEKDAKALQFIEDMTKNVDEVQRRVLEEILSQNADTEYLRKFQLN
GATDRDTFKSKVPVVTYEDLHPEIQRIANGDRSPILSAHPISEFLTSSGTSAGERKLMPT
IREEMDRRQKLYSLLMPVMNLYVPGLDKGKGLYFLFVKAETKTPGGLVARPVLTSYYNSE
QFKTRPYDPYNVYTSPNEAILCVDSFQSMYTQMLCGLLMREEVLRVGAVFASGLLRAIRF
LQLHWKQLADDISTGTLNPKITDPSLRECISKIVEPNPELSEFITGECSAENWEGIITRI
WPNTKYLEVIVTGAMAQYIPTLEYYGGGLPLSCTMYASSECYFGLNLKPMSKPSEVSYTC
MPNMCYYEFLPHDPNAPALSRDSPPRLVDLADVEAGKQYELIITTYAGLCRYRVGDILQV
TGFYNSTPQFRFIRRKNVLLSIESDKTDEAELQKAIENASALLREFNTSVVEYTSYADAK
SIPGHYVIYWELLVKDQENSPSHEVLNQCCLAMEESMNSVYRQSRVADNSIGPLEIRVVK
NGTFEELMDYAISRGASINQYKVPRCVNFTPIMELLDSRVVSVHFSPAAPHWNPEQRRC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtccattgattcactgctctcgtctccgctaggccctccggcatgcgagaaggatgcg
aaggctcttcagttcatcgaggatatgacaaagaacgtagacgaggtccagaggagagtt
ttggaggagatactgagtcagaacgccgacaccgagtacctcaggaagttccagctcaat
ggggcgacggaccgcgacactttcaagtcgaaagtccctgtggttacgtacgaggatctt
caccctgagatccaacgtattgctaatggcgaccgctccccaatcctatcagctcaccct
atttctgagttcctcaccagctctggaacttcggctggtgagagaaaattaatgccaacg
attcgtgaagagatggaccgtcgccagaaattgtacagccttctcatgccggtgatgaac
ctatacgtcccgggtctagacaaagggaagggactctactttttgttcgtgaaggccgag
accaagactccaggtggcctcgtggcacgtcctgtgctcaccagctactacaatagtgag
cagttcaagaccaggccatatgacccttacaatgtttacaccagcccgaacgaggccatt
ctctgtgtcgactcttttcagagcatgtacacccagatgctctgtggcctcctcatgcgc
gaagaggtcctccgagtcggtgctgtgtttgcctcgggcctactgagagccatccgcttc
ctacaacttcactggaaacaactggccgacgacatctcaactggaaccttaaaccctaaa
atcacagatccatctctccgggaatgcatctccaaaattgtcgaacccaacccagaactc
tccgagttcataaccggagagtgttcagcagagaattgggaaggtataatcacaagaatt
tggccaaacacgaaatatctagaggtgattgtaacgggtgctatggctcagtacataccc
acacttgagtattacggtggagggctgcctctttcctgcaccatgtacgcatcctccgag
tgctactttgggcttaatctaaagccaatgtccaagccttccgaggtctcctatacttgc
atgccaaacatgtgttactatgagttcttgccacacgacccgaacgctccagctctatct
cgcgactcacctccacggcttgtcgaccttgctgatgtagaagccgggaaacaatacgag
ctcataatcacaacctatgccgggctctgccgctaccgagtgggtgacatcctccaagtc
accggtttctacaattcgactccacaatttcgcttcataagaagaaagaacgtgctgttg
agtatcgaatccgacaagacagacgaggctgagttgcagaaggctatcgaaaatgcatca
gcgctcctacgggaattcaacacaagcgtggtcgagtacacgagctatgctgacgcaaaa
tcgatccccggacactatgttatttactgggagttgctagtgaaggatcaggagaattca
ccgagtcatgaggtactgaaccaatgctgcttagccatggaggaatctatgaactcggtg
tacagacaaagccgagttgccgacaactcaatcggaccactcgagatcagagtggttaag
aacggcacatttgaggagctcatggattatgcaatctctcgtggtgcatcgatcaaccag
tacaaggtaccaaggtgcgtgaatttcacccccatcatggaactcctcgactccagagtg
gtctcggtgcattttagcccagcggcaccgcactggaaccctgaacagcgtcgttgttga
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