Carya illinoinensis (pecan): 122305079
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Entry
122305079 CDS
T08745
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122305079
03036 Chromosome and associated proteins [BR:
cill03036
]
122305079
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
122305079
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
122305079
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
122305079
microRNA pathway
RISC loading complex
122305079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
122305079
NCBI-ProteinID:
XP_042973314
LinkDB
All DBs
Position
3:49540094..49552567
Genome browser
AA seq
940 aa
AA seq
DB search
MQMKDPLENSVILENTQTLRKPLQNSMNQKTPTQMVHKNEDFLEHKKKTMTSRKGRRRGR
LPKVERLQESELDLDVGYLASCKNLMLHRRPGYGQLGTKCLVKANHFLAEIPGSDICQYT
VNIKPEITSSKLNRVIMTQLVKLYRETDLGMRLPVYDGGRNLYTAGLLPFASKDFTIVLN
DDYQGTGNGREQQFKVTISFVALASMHQLRELLAGKSVDTPQEALTIIDIVLRQLPGQRY
ISVGRFLYSPDIKKPQPLGGGLESWRGFYQSIRPTQMGLSLNIDMSSAAFIEPLPVIDFV
AQILDKDVFSRPFSDADRVKVKKALRGVKVEVTHRGNVRRKYRISGLSSQPTRELIFPVD
EQRNMKSVVEYFQEMYGYVIRYPHLPCLQVGNQKKVKYLPMEACKIVSGQRYTKGLNEKQ
ITSLLKVSCQRPQEQEMDILQTVHQNDYDQDPYAKEFGIIIDSKLASVEARVLPAPWLKY
SDSGKETEYLPQVGQWNMMNKKVVNGSTIRYWACINFSRTVQEGTARGFCQQLVRMCKIS
GMEFNMDPVIPIYSTRPDQVKKALKYVYCAATSNLEGKELELLIAILPDNNGSLYGELKR
ICETELGLISQCCLTKYVFKSSRQYLANLSLKINVKMGGRNTVLLDALRWRIPLVSDIPT
IIFGADVTHPENGEDSYPSIAAVVASQDWPEVTKYAGLVCAQPHREELIQDLFKTWKDPQ
HGTVTGGMIRELLLSFKNATGQKPLRIIFYRDGISEGQFYQVLLYELDAIRKACASLEPT
YQPPVTFIVVQKRHHTRLVATNHNDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAG
IQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAYRARF
YMEPEVHDHSKTCSPQTTNGSFVRPLPALKDKVKNVMFYC
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatgaaagaccctctggagaacagtgtgatattggagaacactcagacattaagg
aaaccactacagaactctatgaatcagaaaacaccaacccagatggtgcacaaaaatgaa
gatttcttggaacataaaaagaagaccatgacgagtaggaagggaaggagaagaggaaga
ttaccgaaagtcgagagattgcaagaatcagagcttgatttagatgtggggtaccttgct
tcatgcaaaaaccttatgttacaccgcaggcctggatatggccagctgggaacaaagtgt
ttagttaaagccaatcacttccttgcagagataccagggtcagatatctgtcaatatact
gttaatataaagcctgagattacttcttcgaaattgaacagagtcatcatgacacagttg
gtgaaactttatagagagactgacttggggatgaggctccctgtttatgatggaggaaga
aatctttacacggccggattgctaccttttgcctcgaaagacttcaccatagtactgaat
gatgattaccaggggacaggcaatggaagggaacaacaatttaaggtgacaatcagtttt
gtagcactagccagtatgcaccaattgcgtgagcttcttgcagggaaatcagttgatacc
cctcaagaggcgcttaccattattgatattgtcttgcggcaactgccaggccaaaggtat
atatcagttggaaggtttctatattctcctgatattaagaaaccgcagccgcttggtggt
ggcttagaatcatggagaggtttctaccagagtattagacctacacagatgggactatcc
ctgaatattgacatgtcatctgctgcattcattgagccactcccagtcattgattttgtt
gctcagattttggataaagatgtgttttcgaggccattttcagatgcagatcgtgtaaag
gtcaagaaagcccttagaggggtcaaagttgaagttacacacagaggaaatgttcgaagg
aaatatcgaatttcagggttgtcatcacagcctacacgggagctaattttcccagtagat
gagcaaaggaacatgaaatctgttgttgagtactttcaagagatgtatggatatgtcatt
cggtatccccacctaccttgtcttcaagtgggaaaccagaagaaggtgaagtacttgcca
atggaggcatgcaagattgttagcgggcagagatacacgaaagggctgaatgagaaacag
attacttctctgctaaaagtttcatgccaaagaccccaggaacaagaaatggacatttta
cagacagttcaccaaaatgactatgatcaggatccctatgcaaaggagtttggcatcatt
atagacagcaagcttgcatctgttgaggctcgggttcttccagctccatggctcaagtat
agtgatagtggaaaggaaacagaatacttgcctcaagttggtcaatggaatatgatgaac
aagaaagtcgtaaatggaagcaccatcagatattgggcttgtatcaacttctcacgaact
gtccaagagggcactgctcgtggtttttgtcaacagttggttcgaatgtgcaaaatctct
ggcatggaatttaacatggaccctgtgattcctatatattcaaccagaccagatcaggta
aagaaggccttgaaatacgtttattgtgctgctacaagcaatcttgaaggaaaagagttg
gagttgcttatcgccattcttccggacaacaatggttctttgtatggtgaactgaaacga
atctgcgaaacagagctagggttgatttcacagtgctgccttacaaaatatgtcttcaag
agtagcagacagtatctggcaaatctctctcttaaaatcaatgtcaagatgggaggaaga
aatacagtgcttctagatgctttacgttggaggattcctttagttagcgatattccaaca
atcatttttggagctgatgttactcatccagaaaatggagaagattcttatccatctata
gctgcggttgtggcctcccaagattggccagaagttacaaagtatgccggtttggtatgt
gcacagcctcatcgagaagaacttatccaagacttattcaaaacctggaaagatcctcaa
catggtacggttactggaggcatgatcagagagcttctactttcttttaagaatgctact
ggacagaaaccattgaggatcatattttacagggatggtatcagcgagggacagttctac
caagtcttactatatgaacttgatgccattcgtaaggcttgtgcatcattagaacctact
taccaacctccggtaacatttattgtcgttcaaaagcggcaccacactagactcgttgca
actaatcacaacgacagaagtagcaccgacaagagtggaaatatcttacccggcactgtg
gtggattcaaaaatctgtcatccaactgagttcgacttttatttatgtagtcatgctgga
atccagggaactagtcgacctgctcattatcatgttctctgggatgagaacaattttact
gcagatgaaatccaatctctaaccaacaacctgtgctatacgtatgctcgatgcactcga
tctgtttctgtagtgcctcctgcatattatgcacatctggcggcctacagagctcgattc
tacatggaacctgaggtgcatgatcattctaaaacatgttccccacagacaacaaatggg
tcatttgtccgtcccctgccagctttgaaagacaaggtgaagaatgtgatgttttactgc
tag
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