Carya illinoinensis (pecan): 122305141
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Entry
122305141 CDS
T08745
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122305141
04075 Plant hormone signal transduction
122305141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122305141
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122305141
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GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122305141
NCBI-ProteinID:
XP_042973408
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Position
3:50593214..50596812
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AA seq
644 aa
AA seq
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MSTLVNYSGDDEFYPRGSFYSNPVDLGRLFSIGSHVDVYYPPSKRARIIAPFLFGGNEFE
QDKKPSIEVLPQECLFEIFRRIPEGKERSSCACVSKQWLMLLSSIRKAEICEKFPISKNV
DMVTGDESRDLESDGYLTRCLVGKKATDIRLAAIAVGTSSRGGLGKLSIRGSNSACGVTD
LGLSAVAHGCPSLKSLSLWDVSSIGDDGLSEIAKGCHLLEKLDLCQCPSISNKGLIAIAD
NCPNLTTLNIESCSNIGNEGLQAIGRLCTKLQSLSIKECPLVKDHGVSSLVSSSSLLTKV
KLEALKITDFSLAVIGHYGQAITNLVLGGLQNVSEKGFWVMGVAQGLQKLTSLTVTSCRG
ITDVSLEAIGKGCINLKQMCLRKCCFVSNNGLIAFAKAAGSLESLQLEECDRVTQLGIIG
ALSNCGTKLKSLTLVKCMGIRDMAMGFPVLSPCTSLRSLSIRHCPGFGTASLAMVGKLCP
QIQHLDLSGLHGITDSGLLPLLESCEAGLTKVILSNCLNLTNEVILALTRLHGGTLELLN
LEGCRKITDDSLRAISENCLLLNDLDVSNCAISNSGIEVLSCAAQLNLQVLSLSGCSEVS
KKSMPFLEKLGKTLVGLNLQHCKSISSSTVELLVERLWRCDILS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccctcgtcaattacagtggtgacgatgaattctaccccaggggttctttttac
tcaaatccggtggatttgggtcgcttgttctccattggttcccatgtggatgtgtactac
cctcctagcaagcgggctcggattattgccccattcctctttggaggaaatgagttcgag
caggacaagaaaccttccattgaggttcttcctcaggaatgtctttttgagatattcaga
cgcatccctgaaggtaaagagaggagctcctgtgcttgtgtctccaagcaatggcttatg
cttctgagcagtattcgtaaggctgaaatttgtgagaagtttccgatttctaaaaatgtt
gatatggttaccggtgatgaaagtcgagatcttgaaagtgatggataccttacgaggtgc
ttggtcgggaagaaagctacagatataagacttgcggcaattgcagttggaactagtagc
cgtgggggtttagggaagctatcaatccgaggaagcaactctgcttgtggagtcactgac
cttggtctatcagctgttgcccacggttgcccttctctcaagtctctttctttgtgggat
gtttcttctattggggatgatggcctatctgagatagctaaaggatgccatttgttggag
aagcttgacctttgccagtgtccctctatttccaacaagggtttgattgcaattgcagat
aactgccctaatctgactactttgaatattgaatcatgttcaaatattgggaatgagggc
ttgcaagctatcggaaggctttgcaccaagctgcagtctctctctatcaaagaatgcccc
cttgttaaggatcatggggtatcaagtctggtatcgtcgtcttctttgctgacaaaggta
aagcttgaggccttgaaaattacagatttctcccttgccgtgattgggcactatggccaa
gccattacaaatctagtccttggtggtcttcaaaatgtgagtgagaagggcttttgggtc
atgggtgttgctcagggtctgcaaaaactgacatcgttgacggtgacctcttgccgaggg
attacggatgtgagtcttgaagccattggcaagggatgcattaacctgaagcagatgtgc
cttcgcaagtgctgctttgtgtccaataatggactgatagcttttgccaaagctgcagga
tctctggagagcctgcagttggaagagtgtgacagggtcacccagctagggattattggt
gccctctcaaattgtggaaccaagttgaagtctcttaccctagtgaagtgcatgggaatc
agggatatggctatgggatttcctgtgctctctccctgcacatctcttcgatccttgtcc
attcgacactgccctggatttggtactgccagcttggctatggtgggtaagttgtgccct
cagattcaacatctagaccttagtgggcttcatggaataacagattctgggcttctcccg
cttctggagagctgtgaggcaggacttaccaaggtgatacttagcaattgcttgaatttg
acaaatgaagtaattttggccttgaccaggctacacgggggaacccttgagctgctgaat
cttgagggatgcaggaagattactgatgatagcttgagggcaatatcagagaactgcttg
ttactcaatgatctggatgtgtcaaactgtgcaatcagcaattcaggcatcgaagtgctt
tcttgtgctgcgcagctcaatttgcaagtcctttcactgtcggggtgttctgaagtgtca
aaaaaaagcatgcctttcctggagaaactgggtaagaccctggtggggctgaatctccaa
cactgcaaatcaattagcagtagcacagttgaactgcttgtggagagattgtggagatgt
gatattctctcttaa
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