Carya illinoinensis (pecan): 122305215
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Entry
122305215 CDS
T08745
Name
(RefSeq) heparanase-like protein 3
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00531
Glycosaminoglycan degradation
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122305215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cill00536
]
122305215
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
122305215
Glycosaminoglycan binding proteins [BR:
cill00536
]
Heparan sulfate / Heparin
Enzymes
122305215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
122305215
NCBI-ProteinID:
XP_042973510
LinkDB
All DBs
Position
3:complement(51704861..51708004)
Genome browser
AA seq
531 aa
AA seq
DB search
MSSPVLLVWIGIWMCVFSHSAIIPAVGGSAEGTVFVDSQTIIGRTDKDFICATLDWWPPE
KCDYGTCSWGHSSLLNLNLSNNILANAIKAFSPLKLRLGGSLEDQIIYDTEDNRQPCLPF
VQNSSAMFNFSHGCLPMPRWDELNALFKKTGAKIIFGLNALSGRTLQPDGTSTGTWDHKN
AESFMRYTVSKNYTIHGWELGNELCAEGVGTRVLADQYALDTIALEDMVQRVYKGIKPRP
LILAPGGFFDEKWFIDFIDRTTPTLGAVTHHLYNLGAGVDKNLVNKILDPSYLDRVYDTF
KDLLDILKMYSTRAVAWVGESGGAYNSGQHLVTNAFVFSFWYLDQLGMSSAHDTKTYCRQ
SFIGGNYGLLNTTTFEPNPDYYSALLWHRLMGRNVLPTSFSGTKKIRAYAHCSRVSRGIT
LLLINLDNSTTVYADVAFNSTGTFKRKTILLPPPFKGGNIREEFHLTAKDGDLHSQTVLL
NGNILAVNSAGDIPPFVPVYVNSLTPIQVAPHSIVFAHLPNADVPACRLRH
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgagttctccggttttgcttgtgtggattggaatttggatgtgtgtttttagtcacagc
gccatcattcctgctgtgggtggcagtgctgaggggactgtttttgttgatagccaaaca
atcatcgggaggactgacaaagattttatctgtgcaaccttagattggtggcctcctgag
aaatgtgattatggaacatgcagctggggtcattcctctctgctcaatctgaatctgagc
aacaatattctagcaaatgccataaaagccttttcccccttgaaacttagacttggtggc
agtttggaagatcaaatcatatatgatacagaagataaccggcaaccttgtcttcctttt
gttcaaaattcctcagccatgtttaatttctctcatggttgcttacccatgcctagatgg
gatgaattaaatgctctcttcaagaaaaccggggctaaaattattttcgggttgaatgct
ctctctggaagaactctacagcctgatggaacttcaacgggaacttgggatcacaaaaat
gctgaatctttcatgcgttatactgtcagcaagaactacactattcatggatgggagctg
ggaaatgaattgtgtgcggaaggagtcggaacaagagttctagcagatcagtatgctttg
gacactatcgctttggaggacatggtccaaagagtttacaagggaattaaacccaggcca
ctaatcctagcaccgggaggattctttgacgagaaatggtttatagatttcatagacagg
acgaccccaactctgggtgccgtcacccaccacttatacaatctgggggcaggagttgat
aagaaccttgttaacaagattctggatccgtcctacctcgaccgcgtgtatgatacattt
aaggatctccttgacatcctcaagatgtattcaactagagcagttgcatgggttggagag
tcagggggggcttacaacagtggccagcatcttgtcacaaatgcatttgtgtttagtttc
tggtatttggatcagctaggaatgtcatcagctcatgacacaaaaacttactgcagacag
agttttattggtggaaactatggtttactcaacactactacctttgaaccaaatccagac
tactacagtgctcttctttggcaccgattaatgggaagaaatgttcttccaactagcttt
tctggaacaaagaaaatacgtgcttatgctcactgctcaagagtttctagaggaatcacg
ttattactaatcaacctagacaacagcaccaccgtctatgccgatgtagccttcaatagt
actgggacctttaaaagaaaaaccattctgctgcctccaccttttaaaggcggaaatata
agagaggagttccatctaacagcaaaagatggagatctacacagccaaactgtcctgcta
aatggaaatattttagctgtaaattctgctggggacatacctccatttgtgcctgtatac
gtaaattcattaaccccaatacaggtggctccccactctattgtatttgcacacctgcca
aatgctgatgtccctgcttgtaggttgcggcactag
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