Carya illinoinensis (pecan): 122305266
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Entry
122305266 CDS
T08745
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00260
Glycine, serine and threonine metabolism
cill00400
Phenylalanine, tyrosine and tryptophan biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
cill01230
Biosynthesis of amino acids
Module
cill_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122305266
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
122305266
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
122305266
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
ThiG
PcrB
Ribul_P_3_epim
FMN_dh
NanE
IGPS
Motif
Other DBs
NCBI-GeneID:
122305266
NCBI-ProteinID:
XP_042973593
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All DBs
Position
3:complement(52474498..52482894)
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AA seq
314 aa
AA seq
DB search
MAVSFKSPKTSFFQLKKSPHTQSFIRFPSHRLAVPSTRFTPMASVSTNQTVGLSETFTRL
RKQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGSPYSDPLADGPVIQAAATRA
LARGTNFNAIISMLKEVVPQLSCPLALFSYYNPILKRGVQKFMYTIKDVGVHGLVVPDVP
LEETEILRKEAAKNGIELVLLTTPTTPTARMKAIVEAAEGFVYLVSSVGVTGARTSVSDR
VKTLLQDIKQETTKPVAVGFGISKPEHVKQIAGWGADGVIVGSAMVKVLAEAKSPAEGLK
ELETFAKSLKAALE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggccgtttctttcaagtcaccaaaaacgagcttctttcaattgaagaagagccctcac
acccagtcttttatccgctttccctctcataggttagcagtcccaagtacaagattcact
ccaatggcttctgttagcactaaccaaaccgttgggctctctgagactttcactagattg
agaaaacaaggcaaagtggcatttattccatacatcacggctggtgatcctgacctttct
accactgcagaagcattgaaggtgcttgactcctgcggatcagacataatcgagctgggt
tcaccatactctgatcctttggcagatggtccagttatccaggcagcggctacacgtgcc
ttggcaagagggaccaattttaatgcaattatttcaatgctgaaggaggtggttccacaa
ttatcttgtccacttgcattattctcatattacaacccaattctcaagcgaggtgtccaa
aagttcatgtacaccataaaagatgttggagtacatgggcttgtagtcccagatgttccg
ctagaggagactgaaattctgagaaaggaagcagcaaagaatggaattgaactggtactc
ctcacaacacccactaccccaacagctcgaatgaaagccattgttgaagctgcagaagga
tttgtgtatcttgtaagctcagttggggtcactggtgctcgcacatctgtgagtgatcgg
gttaaaacccttcttcaagatattaaacaggagacaaccaaacctgtggcagtgggcttt
ggcatatcaaaacctgagcatgtgaaacagatagcaggatggggagccgatggtgttatt
gttgggagtgcaatggtgaaggtgctggctgaggcgaaatcccctgcggaagggctgaaa
gaattagaaacattcgccaaatccctaaaagcggcacttgaatga
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