Carya illinoinensis (pecan): 122305317
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Entry
122305317 CDS
T08745
Name
(RefSeq) RING-H2 finger protein ATL1-like
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122305317
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122305317
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122305317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Prok-RING_4
zf-RING_4
Prok-RING_1
Curto_V3
zf-RING_16
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122305317
NCBI-ProteinID:
XP_042973671
LinkDB
All DBs
Position
3:complement(53709650..53711860)
Genome browser
AA seq
347 aa
AA seq
DB search
MAPNQNHFYSIGSQALKPIKTQANSIYQPALPTSESAFPILAIAVLCIMTTALLLVSYYI
VVTKCCSNWHQANLLRWFSTLRARESEDPFIALSPSMWNRGLDESVIREIPMFPFRREGE
ARGVCCVVCLNEFQEEDMLRVLPKCSHTFHLDCIDIWLQSNANCPLCRSSISGTNRYRID
HIIAPSSSPQNSQLLSNSIMSSDEDFVVIELGGEDEVAFPQRQQERNDSLEVPVQPRNNS
PRKLEKKPGNLKPRKFHHVSIMGDECIDTRKKDDQFSIQPIRRSFSMDSAADQQLYLTVQ
EITLQNRDHSLEVSTSEACDSRGRRSFFPFRHGRGSRKAILPIESEL
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaaccagaatcacttctacagcattggatctcaggctctaaaacccattaaa
acccaggcaaactcaatttatcaacctgccctgcctacttcagaatctgcttttcctata
ttagccattgctgttctatgcatcatgaccacagctttgttgctagttagctactacatc
gttgtgaccaagtgctgctcaaactggcaccaagctaatctgctgagatggttttctaca
ttgagagcaagagaaagtgaagatccctttatagctctctctccatcaatgtggaatcgt
gggcttgatgagtctgtcattcgtgaaatcccaatgtttccattcagaagggaaggggag
gcaagaggtgtctgttgtgtggtttgtctgaatgagtttcaagaagaggatatgctaagg
gttcttcccaaatgcagccatacattccacttggattgcatcgatatatggcttcaaagc
aatgcaaattgccctctatgcagatcaagcatttcaggcacaaacaggtatcggattgat
catattattgcaccaagctcttcaccacaaaactctcaactcttgtccaatagcatcatg
agtagtgatgaagactttgtggtaattgaattggggggagaagatgaagttgcattccca
caaaggcaacaagaaagaaatgattcactagaagttccagtgcagcccaggaataattca
ccaaggaagttggaaaagaagcctggaaacttaaaaccaagaaagttccaccatgtttcg
atcatgggagatgaatgcattgatacaagaaagaaagatgatcaattttctattcaaccc
atcagaagatctttctcaatggattctgcagctgatcaacagctgtacttaactgttcaa
gaaatcactctacaaaatagggatcacagtctcgaagttagtacaagcgaagcttgcgac
agcagaggtcgaagatcattcttcccatttagacatggccgaggatccagaaaagcaatt
cttcccattgaatccgagctttaa
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