KEGG   Carya illinoinensis (pecan): 122305317
Entry
122305317         CDS       T08745                                 
Name
(RefSeq) RING-H2 finger protein ATL1-like
  KO
K19041  E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cill04121]
    122305317
Enzymes [BR:cill01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122305317
Ubiquitin system [BR:cill04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122305317
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-ANAPC11 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-RING_4 Prok-RING_1 Curto_V3 zf-RING_16 zf-RING-like
Other DBs
NCBI-GeneID: 122305317
NCBI-ProteinID: XP_042973671
LinkDB
Position
3:complement(53709650..53711860)
AA seq 347 aa
MAPNQNHFYSIGSQALKPIKTQANSIYQPALPTSESAFPILAIAVLCIMTTALLLVSYYI
VVTKCCSNWHQANLLRWFSTLRARESEDPFIALSPSMWNRGLDESVIREIPMFPFRREGE
ARGVCCVVCLNEFQEEDMLRVLPKCSHTFHLDCIDIWLQSNANCPLCRSSISGTNRYRID
HIIAPSSSPQNSQLLSNSIMSSDEDFVVIELGGEDEVAFPQRQQERNDSLEVPVQPRNNS
PRKLEKKPGNLKPRKFHHVSIMGDECIDTRKKDDQFSIQPIRRSFSMDSAADQQLYLTVQ
EITLQNRDHSLEVSTSEACDSRGRRSFFPFRHGRGSRKAILPIESEL
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcaccaaaccagaatcacttctacagcattggatctcaggctctaaaacccattaaa
acccaggcaaactcaatttatcaacctgccctgcctacttcagaatctgcttttcctata
ttagccattgctgttctatgcatcatgaccacagctttgttgctagttagctactacatc
gttgtgaccaagtgctgctcaaactggcaccaagctaatctgctgagatggttttctaca
ttgagagcaagagaaagtgaagatccctttatagctctctctccatcaatgtggaatcgt
gggcttgatgagtctgtcattcgtgaaatcccaatgtttccattcagaagggaaggggag
gcaagaggtgtctgttgtgtggtttgtctgaatgagtttcaagaagaggatatgctaagg
gttcttcccaaatgcagccatacattccacttggattgcatcgatatatggcttcaaagc
aatgcaaattgccctctatgcagatcaagcatttcaggcacaaacaggtatcggattgat
catattattgcaccaagctcttcaccacaaaactctcaactcttgtccaatagcatcatg
agtagtgatgaagactttgtggtaattgaattggggggagaagatgaagttgcattccca
caaaggcaacaagaaagaaatgattcactagaagttccagtgcagcccaggaataattca
ccaaggaagttggaaaagaagcctggaaacttaaaaccaagaaagttccaccatgtttcg
atcatgggagatgaatgcattgatacaagaaagaaagatgatcaattttctattcaaccc
atcagaagatctttctcaatggattctgcagctgatcaacagctgtacttaactgttcaa
gaaatcactctacaaaatagggatcacagtctcgaagttagtacaagcgaagcttgcgac
agcagaggtcgaagatcattcttcccatttagacatggccgaggatccagaaaagcaatt
cttcccattgaatccgagctttaa

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