Carya illinoinensis (pecan): 122305332
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Entry
122305332 CDS
T08745
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122305332
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122305332
Meiosis-specific proteins
Cohesin complex and associated proteins
122305332
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
GAS
EzrA
DUF1664
Laminin_II
ZapB
SbcC_Walker_B
DUF3921
HexPS-like
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
122305332
NCBI-ProteinID:
XP_042973687
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Position
3:complement(53958684..53994656)
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AA seq
1213 aa
AA seq
DB search
MPSLASPGKILRLELENFKSYKGIQTIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRSG
HLRGAQLKDLIYAYDDKEKDQKGRRAFVRLVYQLGNGSELHFTRTITSSGSSEYRVDGTT
VTWDIYNAKLRDLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELRRDYDKC
EEEKATAEEKSALTYQKKRTIVMERKQKKEQKEEAEKHLRLQNQLKSLKKEHFLWQLSNI
EKDIARTTEELEDEVKSREDVIKDLEKYEREAGKKKKEQSKYSKEITQLEKKIAERSNKL
DKNQPELLKLKEEMSRINSKIRKFQKELDKKKVEKRKHDRDIVELKNGIQDLTAKLEDLQ
AKGCDSGEKLKLDDNELREYFRIKEDGGMKTAKLRDEKEVLDRQQHADTEVQKNLEENLQ
QLKNRERELDSQHEQMQARLKKISDTSAKHKANLEELKNQLRAMQDKHRNDRSKYGNLKK
RLTETEDQLRELKADRYENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTV
AMGKFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSIRVKPITERLRTLGGTAKLVF
DVIQFDPALEKAILFAVGNILVCDDLAEAKVLSWSGERFKVVTVDGILLTKSGTMTGGSS
GGMEARSNKWDDKKIEGCQKLKEQLELELEELGSIREMQVKESEASGKISGLEKKIQYAD
IEKRSIEDKLANLRQEKQNIEEEINRINPELQKLKSAVDKRSVQIKKLEKRINEIVDHIY
RDFSESVGVANIREYEENQLKAAQNIAEERLSVSGQLAKLKYQLEYEQNRDMESRIKELE
ASISALKNDLEQVKDKEDRAKSSAEEVTGEVSQFKEEVQEWKTKLEECEKEMQEWKNKTS
KATTSISKINRQISSKETQIEQLKSRRQEIVDKCELEQISLPMETGSSAEGPVFDFSQLN
RSLLQDRRPADREKLEVEFKQKMDALISEIERTAPNLKALDQYEALQEKERAVTEEFEVA
RKEEKDKADKFNSVKEERYKLFMDAFNHISNNIDKIYKQLTKSNTHPLGGTAYLNLENED
DPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDEVDAALDN
LNVAKVAGFIRSKSCEGARGNQDAEGGNGFQSIVISLKDSFYDKAEALVGVYRDSERSCS
RTLTFDLTKYRES
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgccatccctcgcctccccaggcaaaatcctccgattagagctcgagaacttcaagtcc
tacaagggcatccagacaattgggcccttctacgacttcacggcgattattggccccaat
ggcgccggcaagtccaatctcatggacgccattagctttgtcctcggcgtacgctcagga
catctccgtggggcgcagctcaaggatctgatctacgcctacgacgacaaggagaaggac
cagaagggccgccgagcctttgtccgtttggtctaccagcttgggaacggctcggagctc
cacttcacgcggaccattacgagctctggtagcagcgagtaccgggtcgacgggacgacc
gtgacttgggatatatataatgccaagctcagggatcttgggattctcgtcaaggcccgg
aatttcctggtctttcagggtgatgtggagtccattgcatctaaaaatcctaaagagctt
actgcacttcttgagcagatatctgggtctgatgaactgaggagagactatgataaatgt
gaagaagagaaagccacagctgaagaaaaatcagcacttacttaccagaaaaaaagaaca
atagtgatggagagaaagcaaaagaaagaacaaaaagaagaagcagagaaacatctacgc
ttgcaaaatcaattgaaatctttgaagaaagaacacttcttatggcaattgtccaatata
gaaaaagacattgcaaggacaaccgaggagcttgaagacgaagtgaaaagccgcgaagat
gttataaaagatctagaaaagtatgaacgtgaagctggtaaaaagaagaaagagcagtca
aaatattccaaagagattacccagttggaaaagaagattgctgagagaagtaataaactt
gacaaaaatcaacctgagcttttaaaactaaaggaggagatgtcacgtataaattcgaaa
atcaggaagttccagaaggaacttgataagaaaaaagttgaaaagaggaaacatgatcgt
gatatagtagagcttaagaatggcatacaggatctgactgcgaagctagaagatttacaa
gcaaaaggttgtgatagtggtgaaaagctcaagttggatgacaatgaattgagggaatat
tttcgaattaaggaggatggtgggatgaaaactgcaaagctaagagatgagaaagaagtt
ctggacagacaacaacatgctgacactgaagttcaaaagaatctggaagagaatcttcaa
cagcttaaaaatcgagagcgtgaactggactcacagcatgaacagatgcaagcaagactg
aaaaagatttccgatacatctgcgaaacataaggctaaccttgaagaacttaagaatcaa
ctgcgtgcgatgcaagacaaacatcgaaatgacagatctaaatatggaaatttgaaaaaa
aggctgactgaaacagaagatcaacttcgcgaattgaaggcagatagatatgaaaatgag
agggatgccaggttatctcaagcagttgagactctcaaacgcctgtttcagggagtccat
ggtcgcatgacagatctttgtaggccaacgcagaaaaaatataatcttgccgttactgtg
gctatgggtaaatttatggatgcagtagtagtagaggatgaaaatacggggaaggaatgc
atcaagtacttgaaagaacaaaggctacctccccagacatttatacctcttcaatcaatt
cgtgtgaagccaataactgagagattgcgcacattaggtggtactgcaaagctggtcttt
gatgtaatccagtttgatcctgccttggagaaggcgattctttttgctgtgggaaatatt
cttgtttgtgacgaccttgctgaggcaaaggttctaagctggagtggtgagaggtttaaa
gttgtgactgttgatggaattctgctcaccaagtctgggacgatgactggtggttcaagt
ggtggaatggaagcacggtcaaacaagtgggatgataaaaagattgaaggatgtcagaaa
ttgaaggaacaactcgagttggagttggaagagcttggttctattagagagatgcaggta
aaagagtctgaagcatctgggaaaattagtggactagaaaagaagattcagtacgcagat
atcgaaaagcgaagcatcgaggacaaacttgcgaatttgcggcaggagaagcagaatatt
gaagaagaaatcaatcgtataaatcctgaactgcagaagctaaaaagtgctgttgacaaa
aggagtgttcaaattaagaagctggagaagaggatcaatgaaattgttgaccacatctac
agagacttcagtgaatctgttggggtggcaaacattcgtgaatacgaagaaaatcaacta
aaggctgcacagaatattgctgaagaaaggcttagtgtgagtggccagctggcaaagttg
aaataccagttggagtatgagcaaaaccgggacatggaatctcgaattaaagagctggaa
gcttctattagtgctctaaaaaatgatttagaacaggttaaggataaagaggatagagcc
aagtcatcagccgaggaagttactggtgaggtcagtcaatttaaggaagaagtacaagag
tggaaaactaagttggaagagtgtgagaaggagatgcaggaatggaagaataagacctcc
aaagctacaacgagcatatcgaaaattaaccgccagatatcttctaaagagacacagatt
gagcagctgaagtcacggaggcaggaaatagtagataagtgtgaattagaacaaataagc
cttccaatggagacaggatcctcagcagaaggccccgtctttgattttagtcagctaaat
agatcacttctgcaggataggagacctgctgatagagagaagcttgaggttgaatttaag
caaaaaatggatgccctaatatcagaaattgaaagaacagctccaaatctgaaggctcta
gaccaatacgaggctctgcaagaaaaggaaagagctgtaactgaagagtttgaagtagcc
agaaaagaagagaaggataaagctgataagtttaactcagttaaggaggagaggtacaaa
ttgtttatggatgctttcaatcacatttccaacaacattgataagatttacaaacaattg
acgaagagcaacacacacccattgggtgggacagcgtatttaaacttggaaaacgaagat
gatccatttttacacggcatcaagtacaccgctatgcccccaacaaagcgttttcgtgat
atggaacagctatctggcggggagaagactgttgcagcacttgcattactcttttccatc
cacagttataggccttcaccatttttcatattggatgaagttgatgctgcactggataac
ttgaatgtggccaaggttgctggattcattcgatcaaaatcatgtgaaggagccaggggt
aaccaggatgctgagggaggcaatggatttcaaagcattgtgatatcgctgaaagacagc
ttttatgataaggctgaagctttggttggcgtttacagggactctgagaggagctgctcg
agaactttgacatttgacctgaccaaataccgggagtcatag
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