KEGG   Carya illinoinensis (pecan): 122305345
Entry
122305345         CDS       T08745                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16 isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cill01009]
    122305345
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cill03036]
    122305345
Enzymes [BR:cill01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     122305345
Protein phosphatases and associated proteins [BR:cill01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122305345
Chromosome and associated proteins [BR:cill03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122305345
SSDB
Motif
Pfam: JmjC JmjN zf-C5HC2 KDM5_C-hel
Other DBs
NCBI-GeneID: 122305345
NCBI-ProteinID: XP_042973731
LinkDB
Position
3:complement(54083353..54090793)
AA seq 909 aa
MLDGCGNLVVWTICEILTRFLLPICCYMLWINFKPCLRRSCGPCELVRTINHYSSELLMD
LGHKRSCCNDENVESFPVPPGFVSLTSFTLRRVERSEETNNSMSFESASTLEPIKTDNMS
DVTDIAELKRSCKRRPWIPFDKSSHSPEESESGLFDMDLPKTCLPKGVTRGCPDCSNCLK
VIARWRPEEARRSVSEEAPIFYPTEEEFEDTVKYIASIRPRAEAYGICRIVPPSSWQPPC
LIKKNNIWENSTFVTHIQQIDGLQKQSSQSKRARFNENVKGKSRSLSMDLNYESSDEDAT
NPDDVGRFNVESFESEPGPKFALETFKIYADDFKCQYFCSGGKVTGRDKNSTGFQDKGEP
SLDDIVGEYIRIVENPTEEIEVLCANLETGVFGSGFPRVSNLVEISGYTKYLKSSWNLNN
IPKLPGSLLSFETEETSHILQPQLRVGMCFSSLQWKSEEHHLYSLCYMHLGAPKIWHCVP
GCYNVKFETAVKKYFPDLLVEPLLGHKLVTEKSASMLKSEGIPIYRCIQYPREFVLVFPG
AYHTAFDSGFNCTEVVNFAPLDWLPFGQNAVELYHEQGRKTSLSHDKLLLGAAREAVRAQ
WELVLCGNNTSDNLRWKDVCGKGGILAKALKSRIKYEGIRRKYLCNSSRSQRMRKNFDAT
GKKECTVCLYDLHMSAASCQCNPNKFSCLNHAKQLCSCPWGDKFFLFRYEMNELDILLEA
LEGKLSAVYRWAKDDLGLSLHSSVSKNSPQEPWLAGRQNSRSEESKQKEHKSQNVGKPNG
IDRNSASNIKAEIKARLLQSKVLNNLKAKDDTVETQDAATRSSISTPASGIETETNAHVL
QSTMSNKPNEYDNAVASTINSSATADGISFLQRQVIFEVSSESTSVSSCSESEEETLDLI
FGSAKKGAV
NT seq 2730 nt   +upstreamnt  +downstreamnt
atgttagatggctgtggaaacttggtggtttggacaatctgtgagatactgacaagattt
cttttacccatatgctgctatatgctttggatcaatttcaagccttgcttgaggcgcagt
tgtggtccttgtgaactggtgcggactattaaccattatagcagtgagctgctgatggac
ttagggcacaaaaggtcttgttgtaatgatgagaatgtggaaagtttcccagttccacca
ggttttgtatctcttacatccttcacattgaggagggtggaaagaagtgaagaaaccaat
aattccatgtccttcgagagtgcatctacactagagccaatcaagacggacaacatgtct
gacgtgaccgatattgcagagttgaagagatcttgcaaacgcagaccatggatacctttc
gacaaaagcagtcacagtccagaggaatctgaatcaggactctttgacatggatctccct
aaaacttgccttccaaaaggggttactcgtggatgcccagattgtagtaattgtctgaag
gtaatagcaaggtggcgtccggaagaggcaagaaggagtgtcagtgaagaggctcccatt
ttctatccaacggaagaggaatttgaagacactgttaagtatattgcaagcatacgccct
agagcagaagcatatggaatttgtcgtattgttcctccttcttcatggcaacctccttgc
ctaattaagaaaaataacatatgggaaaattctacgtttgttacccatattcagcagata
gatgggcttcaaaaacagtcttcacagagcaaaagagctagatttaatgaaaatgtaaag
ggtaagagtagaagtttgagtatggatctaaactatgagtctagtgatgaagatgccaca
aaccctgatgatgttggacgtttcaatgttgaaagctttgagtctgaacctggcccaaaa
tttgctctcgaaactttcaagatatatgcagatgatttcaagtgccaatatttttgcagt
ggaggtaaggttacaggtcgggataaaaattcaactgggttccaagataagggggaacca
tcattggatgatattgtgggtgaatacatacgtattgttgagaatccaactgaagaaatt
gaggtgctttgtgcaaacctggagactggagtttttggcagtggatttccaagagtatcc
aatcttgtggagatatctggttatactaagtatttgaaatcaagctggaacttaaataat
atacctaaactgcccggttctcttctttcttttgaaaccgaggagacgtctcatatctta
cagcctcagcttcgtgtaggaatgtgcttttcttcacttcaatggaaatctgaagagcac
cacttatactcattgtgttacatgcatttgggtgctcctaaaatatggcattgcgttcca
ggatgctataatgttaagtttgagacggccgtgaagaaatactttccagatttgttagtt
gaacctctgttgggtcataagctggttactgaaaaatctgcctccatgttgaagtcagag
ggtatacccatctatcgttgcattcaatatcctagggagtttgttcttgtcttcccagga
gcatatcatactgcatttgactcgggctttaattgtacggaggtggtaaattttgctccc
cttgactggttgccctttgggcagaatgctgtagaactctatcatgagcaaggaagaaaa
acttcactatcccacgataaactgctacttggggcagctagggaagctgtgagggcacaa
tgggaacttgtactttgtgggaataacacatcagataatttgagatggaaagatgtgtgt
ggaaagggagggatattagcaaaagcgctcaagtcacgtattaagtacgaaggtattagg
aggaagtacctttgcaactcttcacggtcacagaggatgcgtaaaaattttgatgctacc
ggcaaaaaggaatgcacagtgtgcctctatgacttgcacatgtctgcagctagttgccaa
tgcaatccaaacaaattttcatgtttgaatcatgcaaagcagctctgttcttgcccttgg
ggtgacaaattttttctcttccgttatgaaatgaatgagttagatattctacttgaagct
ttggaaggaaaactaagtgcagtctacagatgggctaaagatgatcttggactgtctctt
cattcttctgtctccaaaaatagtccacaagaaccatggcttgcaggccgtcaaaactct
cgttcagaagaatcaaaacaaaaggagcacaaatcccaaaatgtgggaaaacccaatgga
attgatagaaactctgcttctaatattaaggcagaaataaaggcacgtctgctccaatct
aaagtcttgaataacttgaaagcaaaagacgataccgtggaaacccaagatgcagcaacg
cgaagcagcatcagtactcctgcatctggtattgagacagaaacaaacgcacatgtgctt
caatcgacaatgtccaacaaaccaaatgaatacgataatgcagtagcatctacaattaat
tcgagtgcgacagcagatggtatttcatttttgcagagacaggtgatatttgaggtttct
tctgaaagcaccagtgtgtcaagttgctcagagtctgaggaggagacattggatcttatc
tttggttcagctaaaaagggtgctgtatag

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