Carya illinoinensis (pecan): 122305357
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Entry
122305357 CDS
T08745
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
cill04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122305357
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122305357
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122305357
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122305357
03036 Chromosome and associated proteins [BR:
cill03036
]
122305357
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122305357
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122305357
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122305357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
Phage_Inh_C
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
122305357
NCBI-ProteinID:
XP_042973769
LinkDB
All DBs
Position
3:54255864..54276430
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AA seq
539 aa
AA seq
DB search
MDIDVVVEDVASLDPELLQLPELSPVAVKERPHAAEDLFSQWLSLAQTGRLVRSLIDDAK
AGAPINALGNSCNVNAAGSTSLPSMFPAGSAPPLSPRSSSGSPRISKQRTNASLGSPLKL
IGEPVREIIPQFYFQNGCPPPKELKEQCLSRIDDLFKNHVDGLQVHEFKLITKEICKLPS
FFSSSLFRKIDTDCTGIVTRDGFIKYWVDGNMLTMDTATKIFKILRQPECKYLTQVDFKP
VLQELLATHPGLEFLQNTPEFQERYAETVIYRIFYYINRSGNGHLTLRELKRGNLIAAMQ
HADEEEDINKVMRFFCYEHFYVIYCKFWELDTDHDFLIGRENLVKYGNHALTYRIVEIIF
SQVPRKFTSNVEGKMGYEDFVYFMLSEEDKSSEPSLEYWFKCIDLDSNGVITPTEMQFFY
EEQLHRMECMALEPVLFEDILCQIVDMIAPEREDYITLRDLKGCKLSGNVFNILFNLNKF
MAFESRDPFLIRQEREDPTLTEWDRFAHREYIRLSMEEDGEDVSNGSAEVWDETLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatgtggtagtagaggatgttgcttcgttggaccctgaactgttgcagctt
cctgagctgtctcctgtggcggtcaaagagagaccgcatgctgctgaggatttgttctcc
cagtggctttcgcttgcacaaactggcagactggtgagatctctaattgatgatgcaaag
gcaggtgctcctattaatgcccttgggaactcttgtaatgtaaacgctgctggaagtact
tcattgccttccatgtttcctgctggcagtgcacctccactttctcctagaagttcgtct
ggctctccacgcatatcaaaacagaggaccaatgcttctctaggctctcctcttaaattg
attggtgaaccagtacgagaaatcatacctcagttctacttccaaaatgggtgtccaccc
ccaaaggaactaaaagaacaatgtctttctagaattgatgacctgtttaaaaatcatgtg
gatggattgcaagtacatgagtttaagttgattacaaaggaaatatgcaagctaccgtca
tttttctcctcttcacttttcagaaagattgacacagactgcactgggatagtgaccagg
gatggatttattaaatattgggttgatggcaatatgctgacaatggatacagcgacgaaa
atattcaaaattctaaggcagccagaatgtaaataccttactcaggtagacttcaaacct
gtccttcaagagcttttggcaacccatcctgggttggaattcttacagaacacgcctgaa
ttccaagaaagatatgctgaaactgtcatatacagaattttctactacatcaacagatca
ggaaatggccatcttactcttagagagctgaagcgaggaaatctaattgctgccatgcaa
cacgcagatgaggaagaggacattaataaagtcatgaggttcttctgttatgaacacttc
tacgttatatactgcaagttttgggagcttgatacagaccatgactttttgataggcaga
gagaacctcgtcaaatatggtaaccatgctcttacctacaggatcgttgagataattttt
tcacaggttccaaggaagtttaccagtaatgttgaagggaagatgggttatgaagatttt
gtttacttcatgctgtcagaggaagataagtcatctgagcctagtctagagtattggttc
aaatgcatagatttggatagtaatggagttattacccccactgaaatgcaattcttctac
gaggagcagcttcatcgtatggaatgtatggccctagaacctgtgctatttgaggatatt
ttgtgtcaaattgttgacatgattgcaccagagagggaagattatattacactacgtgac
ttgaaaggatgcaaactttcaggaaatgttttcaatatacttttcaatcttaataagttc
atggctttcgaaagtcgtgatccgtttctcatccgtcaggaacgtgaagatccaactttg
accgagtgggatcgctttgcacatagagagtatattaggctttcgatggaagaggatggt
gaagatgtttctaatggtagtgcagaagtttgggacgagacacttgaagctcctttttga
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