Carya illinoinensis (pecan): 122305429
Help
Entry
122305429 CDS
T08745
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122305429
Enzymes [BR:
cill01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
122305429
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
122305429
Prokaryotic type
122305429
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
122305429
NCBI-ProteinID:
XP_042973909
LinkDB
All DBs
Position
3:complement(55057006..55061810)
Genome browser
AA seq
352 aa
AA seq
DB search
MQTSLTISPFTAPSIFPLHQPVLPPQQHRGFSLPAHVSPVNSVKGSGYLSTIGQAIREEE
EYRKARAQVLRKGVDLEGYTIEGVSVGGNETCVIVPELKCAFDIGRCPSRAIQQNFVFIT
HAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKDDVEKLFEIHRSMGQVELNLDLVALD
IGETYEMRDNLVVRAFRTQHVIPSQGYIIYSVRKKLKMQYSSMKGRQIEKLKKSGVEITD
IVLSPEVAFTGDTTPDYMLDPRNADALRAKVLITEATFLDEGFSTEHARQHGHTHLFEII
EHAQWIRNKAVLLTHFSSRYNIEDIRQAVSKLQSKVSAKVVPLTEGFKSMYS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacatctctgaccatttcaccctttactgctccatcaatttttccgctccatcaa
cccgttttaccaccacagcaacaccgcggtttctccctgccagcccatgtcagtcctgtg
aattccgtcaaagggtccggctatttatcaacaataggccaagctataagagaggaagag
gagtaccggaaagccagggcacaagttctccgaaaaggagtggacttggaaggatacaca
attgagggagtctccgttggagggaatgagacttgtgttatagttcccgagttgaagtgt
gctttcgatattggccgttgtccctcgcgcgccattcagcaaaacttcgtttttatcact
catgctcatcttgatcacattggtggtctgccaatgtatgtagccagtcgtggtttgtac
aacttgaaacctccaacggtatttgtgcctccttgcatcaaagatgatgttgagaagctt
tttgaaattcacaggagcatgggccaagtggagcttaaccttgatttggttgcattggac
ataggtgaaacgtatgaaatgcgcgataatctggttgtccgagcttttagaactcaacat
gtcatacccagccagggttatatcatctactcagttaggaaaaagctgaagatgcagtac
agtagtatgaaaggaagacaaattgagaaattgaaaaaatctggtgttgagattacggac
attgtattgtctccagaggtggcattcacaggcgatacaacaccagattatatgcttgat
ccgcgaaatgctgatgccttgagggcaaaagttcttataactgaggcaactttcctagat
gaagggttcagcactgagcatgcacgacaacacggtcatacacatttatttgagatcatt
gaacatgctcaatggattcgaaataaagcagttttattgactcatttctcttcacgctac
aatatagaggacattcgtcaagctgtatcaaagttgcagtcgaaggtgtcagcaaaagta
gttcctcttacagaaggtttcaaatctatgtactcgtag
DBGET
integrated database retrieval system
