Carya illinoinensis (pecan): 122305455
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Entry
122305455 CDS
T08745
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122305455
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122305455
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
122305455
NCBI-ProteinID:
XP_042973940
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Position
3:complement(55382353..55384493)
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AA seq
402 aa
AA seq
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MVSKNNRLMAEATCLLIFLFSVIRIAHGADFNIKNFGAKANGKSDDTQAMSNAWKAACMS
TDPSTILIPNGKYMVGPLTFQGPCKAPVNVQVQGNVLAPTDLNIFKSQNGWMVFQNIDRL
MVSGTGTFDGQGSLAWSQNNCAKTGTCNSLPINLAFTSITNSKIQDISSLNSKLFHMNIL
NCKNVTLQHIIIRAPEESLNTDGIHIGRSSRINITGVDIKTGDDCVSLGDGSQQINIENV
TCGPGHGISVGSLGKYHDEQPVMGVTVRNCTLTSTMFGVRVKTWPNSPSGVASYLDFEDI
VMNNVSTCLLIDQEYCPYAQCNAEVPSRVKISNVSFKNIRGTSATKQAVKIICSRSIPCQ
NVQISDISLQYNGKDGPITSVCKNVKPSAFGKLNPPACANYN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggtttcaaaaaataatcgtctcatggccgaagcaacatgcctcctaatattcttgttt
tcagttatcagaatagcccatggtgcagatttcaacataaaaaactttggagcaaaggct
aatggcaagtcagatgatacccaggcaatgagtaatgcttggaaggcggcatgcatgtcg
accgatcctagcactattttgataccaaacgggaaatacatggttggtccattaacgttc
caaggaccctgcaaggcaccagtcaatgttcaagttcaaggaaacgttcttgctccaaca
gacctcaacattttcaagtcccaaaacggctggatggttttccaaaacattgacagattg
atggtctcaggaacaggaactttcgatggccaaggatcacttgcttggtcccaaaataac
tgtgcaaaaactgggacgtgcaattcactgcccattaatttggcattcacttcgatcacc
aactcaaagattcaggacataagttcgctaaacagcaagttgtttcacatgaacatattg
aactgcaagaacgtgacccttcaacatattataatcagagcgcctgaagaaagcctaaac
actgacggaattcatattggtcgctcatccaggatcaatattactggcgtagacatcaaa
acaggggatgactgtgtctctcttggcgatggaagccaacaaattaacattgagaatgtg
acatgtggacctggacatggcattagtgttggaagcttaggaaagtatcatgacgaacaa
cctgttatgggagttacagtgaggaactgtaccctcaccagcacaatgttcggtgttagg
gtcaaaacatggccaaattctcctagcggcgttgcttcatatttggattttgaggatatt
gtgatgaacaatgtcagcacttgtcttcttatagaccaagagtattgcccttacgctcag
tgcaatgcagaggttccatcacgtgtcaagattagcaatgttagcttcaagaacattcgg
ggaacatccgcaactaagcaggctgtgaagattatatgtagcagaagcattccctgccaa
aatgtgcagataagcgacattagcttgcaatacaatggaaaagatggccctattacatcc
gtgtgcaagaatgtgaagccttcagcttttggaaaactgaaccctcctgcttgtgctaat
tataattaa
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