Carya illinoinensis (pecan): 122305475
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Entry
122305475 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP133 isoform X1
KO
K14300
nuclear pore complex protein Nup133
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122305475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122305475
03036 Chromosome and associated proteins [BR:
cill03036
]
122305475
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122305475
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122305475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
122305475
NCBI-ProteinID:
XP_042973969
LinkDB
All DBs
Position
3:complement(55514747..55522897)
Genome browser
AA seq
1323 aa
AA seq
DB search
MFSPGIRRSNVSSRNERNQGHTVLHSPITPLSENRRSFLQNSVPDRPSTGTPAPWAPRLS
VLARIPPVNRSETGDEADPIKPVYVGEFPQVIRDEQASLLQKRVPDDAFISGGMEKGTSL
AWIIIGNRLFIWNYLSPTASMKCVVLEIPLNALENRDINSTDRNCWLLCVVNWESTSRRT
KKVAKHCNSAGVVLCNQNTRTIIYWPEVYSEGRTAPVTSFASSEELEVTSSHENGKATPN
KQRQRIRCGNNSTGWSSLNSLMASALPGSQHSCVALACCSNGELWQFHCSPTGIHRKKIY
EDKLTLPSQGSDGGQILWSKGYPRSLIWRFSHVSTEGSNREFFLLTDREIQCFSIDMKLD
IRVSKLWSHEIIGTDGDAGIRKDLAGQKRIWPLDLQVDDHGKVITILVATFCKDRVSGSS
YTQYSLLTMQYKSGVSMEPAHERILEKKAPIQVIIPKARVEDEDFLFSMRLRIGGKPSGS
AIILSGDGTATVAHYYRNSTHLYQFDLPYDAGKVLDASVLLSSDDGEEGPWVVLTEKAGI
WAIPEKAVVLGGVEPPERSLSRKGSSNERSAQEETRNLTFLGNIAPRRASSEAWDAGERQ
TGAFTGVVRRTGPDEESETLLSHLFHDFLSSGQVDGSLEKLKSSGAFERDGETSVFARMS
KSIVDTLAKHWTTTRGAEILAMAVVSTQLMDKQQKHKAFLQFLALSKCHEELCSRQRYSL
RIILEHGEKLAGMIQLRELQNVIGEKRSTGVGSSHPSAERRALWDLIQLVGERARRNTVL
LMDRDNAEVFYSKVSDLEEVFYCLDRHLDYVISIEQPLWIQIQRACELSNACATIVREAM
HYRNENNLWYPPPEGLTPWYCQPVVRNGMWSIASFMLQLLNETSGVELSVKSDLYTHLEV
LTEVLLETYAGAVTAKVERGEEHKGLLDEFWSRRDTLLDSLYQQVQDFVDGRHQDLNRGF
EEQKEEIRRKLSLHLLSIAKQHECYRTLWRICCDLNDAALLRNLMHESMGPNGGFSYFVF
KELYEKRQVSKVLRLGEEFPEELSIFLRQHQELLWLHEVFLNQFSSASEILHVLALSCDQ
NSISASEEQADLDSIDFKPKLVDRKRLLNLSKIAAWAATGKDADSETKLKRIEADRKILK
LQEEIMLLLPTDEEKQYVERQLLHPEDLIKLCLKGQNAKLSLCAFDVFAWTGSSFRKTHR
NLMEECWKNAADQDDWSQIYQASIAQGWSDEETLQNLRETMLFLASSRCYGPNAETFGEG
FAEVMLLRRENVEPFSRDPGASVETILMQHKDFPEAGKLMLAAITLGGVQDNTRLEEGPS
PME
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcctggaataaggaggtccaatgtcagctctcgaaacgagcggaatcagggg
cacactgtacttcattctcccatcactcctctctcagagaaccgccgatcctttcttcaa
aattcggttccggatcgacccagcaccggtacccctgctccttgggctcctcgcttgtct
gtcctcgccagaattccaccagtgaacagaagtgagacaggggatgaggcagatccaatt
aagcccgtatatgttggagagtttccacaagtgatccgtgatgaacaggccagtttgctg
cagaagcgtgttcctgatgatgcttttatatctggtggaatggaaaagggaacatccctt
gcttggattatcattggaaacagactcttcatttggaattacttatcacctactgcttca
atgaaatgcgttgttcttgaaatccctttgaatgcattagagaacagagatattaacagt
actgaccggaactgttggttgctttgtgttgtcaattgggaaagcacatctaggagaaca
aagaaagttgcgaaacattgcaattctgctggcgttgttttgtgtaaccaaaacactcga
actatcatatattggcctgaagtatattctgaaggtagaactgctcctgttactagtttt
gcatcttctgaggagttagaggtgacttcttcacatgaaaatggaaaggccaccccaaac
aagcagcgacaacgtattagatgcggaaataactcaactggatggagctcactgaactct
ttgatggcttctgcattacctggttctcagcactcctgcgttgcccttgcatgctgttcg
aatggtgagctttggcagtttcactgcagtcccactggcattcaccgtaagaaaatatac
gaggataaactgactttaccatcccagggtagtgacggtggtcaaattttatggagcaag
gggtatcctaggtcattgatctggcgtttttcacatgtttctacagagggctcaaataga
gagttttttctgctgactgatcgtgagatacagtgctttagcattgatatgaaacttgat
atacgggtgtcaaagctctggtcccatgaaattattggtacagatggtgatgcggggatc
aggaaggatctggctggtcagaagcgaatatggcctcttgatttgcaggtggatgatcac
ggaaaagtgattaccattctggttgccaccttctgtaaggatcgggtcagtggttcaagc
tacacacagtattctcttctgaccatgcaatataaatctggggtgagtatggagcctgca
catgaaaggattctggagaaaaaagctccaatccaagtaataattccaaaagcaagagta
gaagatgaagatttcttgttctcaatgagacttcgaataggaggcaagccttcaggatca
gcaatcatactttctggtgacggaacggcaacggtcgcccattattatcgaaactcaact
cacctctatcagtttgacctgccttatgatgctggaaaagttctagatgcttcagttctt
ctttcttcagatgatggggaagaagggccatgggttgtactaaccgagaaagcaggaata
tgggcaatacctgaaaaggctgttgtacttggtggagttgaaccacctgagcgaagcttg
tcacgtaaggggagctcaaatgaaagatctgctcaagaagagacacggaaccttacattt
ttgggcaatattgctcctagaagggctagttctgaagcatgggatgctggagaaagacaa
acgggggcttttactggggttgtacgtcgaactggcccagatgaagagtcagaaactttg
cttagtcatcttttccatgattttctttcatctggacaggttgatggttcactggaaaag
ctaaaaagctctggggcatttgaaagggatggagaaacaagtgtttttgcacggatgagc
aaatcaattgttgacaccttagctaaacactggactacaaccagaggtgctgagattttg
gccatggctgttgtatctacccaactcatggataagcagcagaagcataaagcatttctt
cagtttctggcattatccaaatgccatgaggagctgtgttctagacagagatattcattg
cgaattatcttggaacatggtgaaaagcttgctgggatgattcaattgagagaactgcaa
aatgtgattggagagaagcgttcaactggagttggctcctcccatccaagtgcagaacgc
cgtgctctttgggatcttattcaattagttggtgagagagcccgccgaaatacagttctt
ctcatggacagagataatgctgaggtgttctatagtaaggtttccgatcttgaagaagta
ttttattgcttagacagacatcttgattatgtaataagcatagagcaaccgctttggatt
cagatccaaagagcttgtgagctctcaaatgcttgtgccactatagttcgcgaggccatg
cactacagaaatgagaataacttgtggtacccaccacccgaaggcttgacgccatggtat
tgtcaacctgtggtacgcaatgggatgtggagcatcgcttccttcatgcttcagctgttg
aatgaaacatctggagttgagttgtcagtgaaatcagatctgtatacccatctagaagta
ctgactgaggttctacttgagacatatgctggtgctgtcacagctaaggttgagcgtggt
gaagaacacaaaggtctattagatgagttctggagtagaagggatacactcctggactcc
ctttatcaacaagttcaagattttgtggatggcaggcatcaggatctaaatagaggattt
gaagagcaaaaagaagaaatccgtaggaagctttctttgcacttgctatccattgcaaaa
cagcatgaatgctacagaactttgtggagaatatgctgtgacctcaatgatgcggcccta
cttagaaatcttatgcacgagagcatgggacctaacggaggctttagttacttcgtcttt
aaagaactgtatgagaagagacaagtttccaaggttctaaggcttggggaagagttccca
gaggagttatctatctttctaagacagcaccaggagcttctttggcttcacgaagtgttc
ctgaatcaattttcttcagcttcagaaattcttcatgtattagctctttcttgtgatcaa
aattctatttcagcttctgaagagcaggcagaccttgacagtattgatttcaaacccaaa
ttggtggacagaaagcgccttttgaatctctcaaagatagctgcatgggcagccacaggt
aaggatgctgattctgagacaaagttgaagcgcattgaagctgataggaaaattttgaaa
ttgcaggaagaaattatgctactccttcctactgacgaagaaaagcaatatgttgaaagg
cagctcctacatccagaagatcttattaagctgtgccttaaaggtcaaaacgcaaagctc
tccttgtgtgcttttgatgtgtttgcatggacaggctcctcctttcggaaaacccacaga
aatctcatggaggagtgttggaagaatgctgccgatcaagatgattggagtcaaatatac
caagcatctattgctcaaggatggagtgatgaggaaaccttacagaatctgagggaaact
atgcttttcctggcttccagcaggtgttatggacccaatgcagaaacctttggagaaggt
tttgccgaagttatgttgttgagacgagaaaatgtggagcctttttctagggatccgggt
gcttctgttgagaccatactgatgcagcacaaggatttccctgaggcaggcaagctgatg
ctggctgctatcactttggggggtgtacaggacaataccagactggaagagggtccttct
ccaatggaatga
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