Carya illinoinensis (pecan): 122305587
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Entry
122305587 CDS
T08745
Name
(RefSeq) E3 ubiquitin-protein ligase ATL41-like
KO
K19038
E3 ubiquitin-protein ligase ATL41 [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122305587
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122305587
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
122305587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_16
zf-RING_6
zf-Vps39_C
Prok-RING_4
DUF7576
CR_prot_dom_plant
Mid2
PHD_NSD
Zn_ribbon_IFT122_C
zinc_ribbon_16
DUF4381
zf-C3H2C3
DUF7248
Prok-RING_1
RINGv
Baculo_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122305587
NCBI-ProteinID:
XP_042974116
LinkDB
All DBs
Position
3:complement(29734313..29735611)
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AA seq
266 aa
AA seq
DB search
MPSSSSKRFLEESDDDENGPWPHLNLSPHRKVSNDFNSKIMLVAIVSLSVVILLVIALHI
YARCVLRRQARRRAAIRQLGLTVAHARSSQQPKPGLDATVIASLPVFVFKQRDDRDHHHD
QDDESATECAVCLSRLANEEMARLLPNCKHIFHAECIDKWLGSHSTCPICRTEAQPLVQP
VSREGPAGLAGGITAPTDPRLGSLQNPGVSYMEEGTSDGCSQSTEKASGSTSRLNSFKRI
LSRERSSRIIHSCSGEDDAIEDLERQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccttcctcctcctctaagcggtttctcgaagaaagtgatgatgatgaaaacggacca
tggccacaccttaatttatcccctcatagaaaagtaagtaacgatttcaatagcaagatc
atgctcgtggccatcgtttcattatcggtggtgatcttgttggttattgccttgcacata
tatgcgaggtgtgtgctacgccgccaggcacgtcgccgagcagccatccgtcaactgggg
ttaaccgtcgctcatgcccgctccagccagcaacccaagcccggactcgatgcaactgtc
atcgcttcgttgcccgtgtttgttttcaagcaaagggatgacagagatcatcatcatgac
caggatgatgagtcggcgacggagtgcgcggtgtgtttaagcaggttagcgaatgaggaa
atggctaggttgctaccaaactgcaagcacattttccatgcggaatgcatagataagtgg
ttgggttcacactcgacgtgtcccatttgtcgaaccgaggcccagcccctggttcagccc
gtgtctcgcgagggtccggcaggtctagccggaggcattaccgcacccacggatccacgt
ttgggcagtctgcagaatcctggagtttcatacatggaagaaggaacatctgatggttgc
agccaatcaacagaaaaggctagcggttcaacctcacgattaaactcattcaaaaggatt
cttagtagggaaagatcgtccagaataattcattcttgcagcggtgaagacgacgccata
gaagatttagagagacagtaa
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