Carya illinoinensis (pecan): 122306059
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Entry
122306059 CDS
T08745
Name
(RefSeq) protein NPGR2-like isoform X1
KO
K21843
tetratricopeptide repeat protein 7
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122306059
Membrane trafficking [BR:
cill04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
122306059
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_14
ANAPC3
TPR_12
TPR_16
TPR_7
TPR_1
TPR_17
TPR_11
TPR_8
ARM_TT21
TPR_Slam
ChAPs
Kazal_C6
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
122306059
NCBI-ProteinID:
XP_042974346
LinkDB
All DBs
Position
4:43357659..43373178
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AA seq
749 aa
AA seq
DB search
MACGLYASAFILGHLKGNMNQNRTRNQRSREIRQKFGKVIKCFCPGEQLGAGDDMVPSLE
SLAIKDYSEIYSSKAGEIEKKLDTGNIEEAESSLRESGCLNNEEARALLGRYEYQKGNIE
AALHVFEGIDIAAVTPNIKVTLARKGQRRKRCSQSSPDPSLSIHAVSLLLEAIFLKAKSL
QGLGRFTDAAQSCKVILDIVESSLPEGLPENFGADCKLQETLNKAVELLPELWTLADSPR
EAILSYRRALLHWNLDAVTTAKIQKEFAIFLLYSGGEASPPDLRTQMDCSFIPTNNIEEA
ILLLVILLRKFSLKRIEWDPSILDHLSFALSVAGDLKALANQVEELLPGFINWKDRYHTL
ALCYYAAGEDSVAVNLLRKLLSGTEDPKYLPALLMASKICGEYPNLAEEGISFARRASES
LDGECNQLESIANFLLGISLLAYSKSVSPDSDRVSRQFEAVQALEKAGAVRGVSDPFILY
HLSLENADQRKLDAALFHAKRLLKLEGGSNVNSWLLLARILSAQKRFMDAITVVNAALDQ
SGKWDQGELLRTKAKLQLAQGQLKISINTYTQLLAVLQVQRKSFDSGKKLIKSSKTPAKS
LELEVWHDLAYVYISLSQWRDAEICLSKSKAICSYSASRCHATGVLYEAKGLYKEALKAF
RDALDIDPTFVPSLISTAVVLRTLGNQSHVVVRSFLMNALRLDRMNHSAWYNLGLFYKAE
GTALSLQEAAECFEAAAFLEESAPVEPFR
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtgggctctatgcctctgcttttattcttggacatttaaaaggcaatatgaat
cagaataggaccagaaaccagaggagcagagaaattaggcagaaatttgggaaggtgata
aagtgcttctgccccggggagcagttaggtgcaggagatgacatggtcccttcattagaa
tcccttgcaattaaggattattcggaaatttattcttctaaagctggtgagattgaaaag
aagctggatactgggaatatagaagaagccgagtcatctctgcgtgagagtggttgtttg
aacaatgaggaagcaagagctttattaggaagatatgaatatcaaaaaggaaacatagaa
gctgctttacacgtatttgaaggaatagatattgctgcagtgactcctaacataaaagtc
acccttgctaggaaaggacaacgtcgtaagagatgttctcagagttctcctgacccatct
ctgtctatacatgctgtcagcttactcttggaagcaatctttctcaaagcaaaatcattg
cagggtcttgggaggtttacagatgctgctcaatcttgcaaagttattctcgacatagtt
gaatcttcattgccagaaggcttgcctgaaaactttggtgctgactgtaaattgcaggag
actctaaacaaggctgtggagttgcttccagaattatggacgcttgctgattctccacgt
gaagccattttgtcatacaggcgggcactcctccattggaatcttgatgcagtaaccaca
gctaaaatccaaaaagagtttgccatctttcttctgtacagtggaggtgaagcaagcccc
ccagatctccgaacccaaatggactgttcattcattcccacaaacaatatagaagaggct
atacttctgttagtgatactattaagaaaattttctctcaagagaattgagtgggatcca
tcaatcctggatcacctttcatttgctctatccgtggcaggggatttgaaggctttagct
aatcaagttgaagaactgcttcctggattcatcaattggaaagataggtaccatactctg
gctctctgttattatgcagcaggggaggactcagttgctgtgaatctacttagaaagttg
ttgagtggaactgaggatccaaaatatctcccagctttattaatggcatcaaagatttgt
ggggaatatccgaatcttgcagaagaagggataagttttgctcgccgagcctctgaaagt
ttggacggcgaatgcaatcaattagaaagtattgccaattttttattgggcatctcgctt
ttggcatattcaaaatcagtttcccctgattcagacagggtctcaaggcagtttgaggca
gttcaggccctggaaaaggctggggcagtgagaggagtgagtgacccctttattctatac
catctcagcctagaaaatgctgaccagaggaagttagacgctgcactctttcatgcaaag
cgcttgctgaaactggaaggtggctctaatgtcaatagttggttattattggcccgtata
ttatcagctcagaaacggttcatggatgccataactgtagttaatgctgcactggatcag
tcaggaaaatgggaccagggagaactgttgcggactaaagctaaacttcaacttgcacag
ggtcagttaaaaatttccataaacacctatactcagcttcttgctgttcttcaagttcag
cgcaaaagctttgattcagggaagaagcttattaagagcagcaaaactcctgctaagagt
ctggaattggaagtatggcatgatcttgcatatgtctacataagcctgtcacaatggcgt
gatgctgagatttgtctttctaaatccaaggccatctgttcttactctgcttctagatgt
catgccacaggtgtactatatgaagcaaagggcctttacaaagaagctctaaaagctttt
agagatgctttggatattgatcccacctttgttccaagcttgatctcaacagctgtggtt
ctgaggacgcttggtaaccaatcacatgtagttgtgcgaagctttctgatgaatgcatta
cggctggacagaatgaatcattctgcatggtataatcttggcttattttataaagctgag
ggcactgcattgtcattacaagaagctgctgaatgtttcgaggctgcagcttttcttgaa
gagtctgcaccagttgaacccttcagatga
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