Carya illinoinensis (pecan): 122306061
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Entry
122306061 CDS
T08745
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122306061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122306061
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122306061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
122306061
NCBI-ProteinID:
XP_042974350
LinkDB
All DBs
Position
4:complement(43375392..43378569)
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AA seq
437 aa
AA seq
DB search
MDSDEGKVFIGGIAWDTTEDTLTDYFGQYGQVSQAVIMRDKPTGRPRGFGFVIFSDPSVL
DRVLQDKHTIDGRTVEAKRALSREEQQTSSRTGNFNAGRTSGGGGNFKTKKIFVGGLPSN
LTEDGFREYFENYGQVTDVVIMYDQNTQRPRGFGFITFDTEDAVDRVLHKTFHDLNGKSV
EVKRALPKDANPGGGGVRGGGYQGYNASSANSNMFDGRTDGSRFMQPQTTAGGFPPYSGY
GGPGYGYGSYGGYGVSGYGSANTGFGNPAGAYGNPNAPNASYGSGAPGALKNTWSSQTSP
GYGASSYGGNAGFGAAAASWNSPGSGGPISAPRGQSPSGASGYGNQVYGYGNYGGSDASY
SGGYGATGGRGGNVPSSNAGGGASGTEQPGIGGGYMGSGYGDTNGNSGYSNTGWRSDPSP
ATGGYGAGYGGAQSRQA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggattcggacgaaggaaaggttttcataggaggaatagcgtgggacaccactgaggac
actttgaccgactatttcggccagtacggtcaggtttcccaggccgtcatcatgcgcgac
aagcccaccggccgccctcgtggcttcggcttcgtcatcttctccgacccctctgtgctc
gaccgtgtcctccaggataagcataccatcgatggccgcacggtggaggcaaaaagggct
ttatcaagagaggagcagcagacctcctctagaactggaaattttaatgctggcagaacc
tctggagggggaggaaattttaagaccaaaaagatatttgttggagggctgccttccaat
cttacagaagatgggtttcgtgagtattttgaaaattatggacaagtaactgatgtggta
ataatgtatgaccagaatacgcaacggcctcgtggttttggtttcataacattcgacact
gaggatgcagttgatagagttcttcacaagaccttccatgacttgaatggtaaatcagtt
gaggtcaaacgagctcttcctaaagatgcaaatcctggtggtggtggggtccgaggtggg
ggctatcaaggttacaatgcctctagtgcaaattcaaatatgtttgatggtcggacagat
ggcagtagatttatgcagcctcaaactactgcaggtggtttcccaccatactctggctat
ggtggaccaggttatggttatggaagttatggtggttatggtgttagtggttatggtagt
gcaaatactggatttggcaatcctgcaggagcatatggaaaccccaatgcccctaatgct
agttatggaagtggggcgccaggtgcactcaaaaatacttggagcagccaaacttctcct
gggtatggtgcgtcaagctatggtggaaatgcagggtttggagccgcagcagcttcttgg
aattctccaggtagtggcggtcctatttctgctccaaggggtcaatcaccaagtggagct
tctgggtatgggaatcaagtttatggatatggtaactatggtggaagtgatgcttcttat
tctggtgggtatggggctacaggggggcgtggtggaaatgtcccaagcagcaatgctggt
ggtggtgctagtggaacagagcaaccggggattggtggtggttacatgggaagtggctat
ggtgacacaaatggaaactcagggtactccaatacaggatggagatctgacccttcacca
gccactgggggttatggagctggatatggtggtgctcagtctaggcaggcttaa
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