Carya illinoinensis (pecan): 122306387
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Entry
122306387 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP58
KO
K14307
nucleoporin p58/p45
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122306387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122306387
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122306387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIA
Nucleoporin_FG
DUF445
Motif
Other DBs
NCBI-GeneID:
122306387
NCBI-ProteinID:
XP_042974749
LinkDB
All DBs
Position
1:complement(3891638..3901221)
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AA seq
504 aa
AA seq
DB search
MAFSMFSTPQPQQQQQLFQPQAQTFQQSSPFFPQQQQQQQQQQLQLFQPPQQQQQQQQQF
QQQQQQQQQQQHLFLFTNDKTPANYGTKWSDLHPESQKILLQIEERILEYRDESQRLDQC
TRLYDSSVCNDAFEPDASRIVQELGGVSTAMERQKAVLQELMAVVKDMLRNTEVAIRSFM
MLRPRFLHPNTGGASNVIAPSQAPGAAATSGMSGQMTATAIVPVFDFYSGVPRKPSPFLQ
QTVARFEKYLGECRQWIEELEQLLLLGSDKNSFNLGYSLLQSLPKVMSNVHDFFLHVAAK
VESIHQYIESMKGAYLADQRRRGYGNDPFLEADRRETARQEAAAKRVHPTLHLPKNSLPS
TQVAGLLASSGTYGTSTSQQTSAATTLASSGSGLSLFGTPTSAPSPVSSSLFATPTTSAP
VSSLFGSSGATPQTSLFGASSGSLFGSASTPSLFTSTAPAFGSTTPSGGSLFSSPFASGA
ATGSGASFGAASKSSKPKSRTGRR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttcgatgttttctactccgcagccacaacaacagcagcagctgtttcagcct
caagctcaaacttttcagcagagcagtccttttttcccgcaacaacagcaacagcaacag
caacaacaattgcaactcttccaaccaccgcagcagcaacaacagcagcagcaacagttt
cagcagcagcagcagcagcagcagcaacagcagcatttgtttctgttcactaacgataaa
actccggcgaattatggtaccaagtggtcggatcttcatcctgagtcccagaaaattctc
cttcagatcgaggagcggatattggagtatagagatgagagccagaggctggatcagtgt
actcgtctttatgattcttcagtttgcaatgatgcattcgagcctgatgcaagccgaatt
gttcaggagcttgggggagttagcactgccatggaacgacagaaagccgtgctgcaggag
ctgatggctgttgtgaaagatatgttacggaacacagaggttgcaattcgttctttcatg
atgctacgcccaaggttccttcatccaaataccggaggtgcttcaaatgtcattgcacca
tcacaagctccaggagcggcagcaacatctggtatgagtggtcaaatgacagcaactgct
atagtgccagtttttgatttctacagtggggttccaagaaaaccatccccctttttacag
caaacagttgccagatttgagaagtatcttggtgagtgccgccaatggattgaagaatta
gagcagcttctcctcttaggttctgacaagaactctttcaatcttggatactcattgtta
caatctcttccgaaagtcatgtcaaatgtgcacgacttttttcttcacgtggctgctaag
gtggagagtattcatcagtatattgaatccatgaaaggagcttatcttgctgatcagcgc
cgccgaggctatgggaatgatccctttcttgaagctgataggcgtgaaacagcaagacag
gaagctgctgctaagagagtacatccaactttgcatttgcctaaaaattcactaccatca
acacaagttgcagggttgcttgccagctccgggacttatgggacatcaacttcccaacag
acatctgccgcgaccacattggcgtcatcagggagtgggttgtcactttttggcacacct
acttctgccccttcccctgtttcatcttctctgtttgcgacaccaaccacttctgctcca
gtatcctctctattcggatcatctggtgctactccacagacatccctttttggtgcttcg
tcaggatctttattcgggtctgcttctactccctctttatttacgagtaccgctccagct
tttggttctaccactccctctggaggttcactattttcatcaccatttgcttcaggtgct
gcaacaggttctggggccagctttggggctgcatcaaaatcatcaaaaccaaagtctcga
actggtagaaggtag
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