Carya illinoinensis (pecan): 122306554
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Entry
122306554 CDS
T08745
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122306554
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122306554
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
122306554
NCBI-ProteinID:
XP_042974912
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Position
4:44196044..44197541
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AA seq
388 aa
AA seq
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MSLKMNIAALPILFLLASVANAKPVVFNILKKYGGKVNEDITLPLTNVWKDACATPGQSK
VVVPAGTYRLGPVQLNGPCKGPIELKVRGTLVAPGYLSFFKWGSWVRFERVDQLTLSGNG
TFDGQGKSIWGKYNGALPINIRFDFITNSMIRGITSLDSKQFHLHVFACKNVTIFHLNIK
APGDSPNTDGIHMGQSTGINIIDSKIGTGDDCISLGDGNRDILIQKVTCGPGHGISIGSL
GKYENEEPVVGVKVVYCNLINTMNGVRIKTWPASLPGAASNMHFENIYMRNVSNPVIIDQ
VYCPWNQCKAQIPSKIKISQVSFKNIRGTSQTKEAVKLLCSNEIPCENVEITNIDLAYQG
SDGPATSQCTNVNPTISGKQNPPACTLK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgaaaatgaatattgcagccctaccaattctgtttctcctagcatcggttgcc
aatgccaaaccggtcgtcttcaatattttgaagaagtatggaggaaaggttaatgaggat
atcacgctgcctttgacaaatgtttggaaggatgcgtgcgcaacgccaggtcagagtaaa
gttgtggtaccagctgggacgtacaggttgggcccagtgcagttaaatggcccctgcaaa
ggtcctattgagcttaaagttcgaggcaccttagtggctccaggataccttagttttttc
aaatggggcagttgggtccgttttgaacgtgtcgaccagttaactttgtcaggcaatgga
acttttgatggccaaggaaaatctatttggggtaaatacaatggtgccctcccaattaat
ataaggttcgactttatcaccaattcaatgattcggggcataacgtcgttggatagcaaa
caatttcacttgcatgtttttgcatgcaaaaacgttaccatattccacttaaatatcaaa
gcacctggagatagccccaatactgatggaatccatatggggcagtcaactggaatcaat
ataattgattcaaagatcggaacaggagatgattgtatctctcttggtgatggcaatcgt
gacatacttattcaaaaagtaacctgtggacctggccatgggatcagcataggaagtctt
ggtaaatatgagaatgaagaacctgttgttggggttaaagttgtatattgcaacctaata
aatacaatgaatggcgtaagaatcaaaacatggccagcttcccttcctggcgctgcctct
aatatgcattttgagaacatctacatgagaaatgttagcaatcctgtcatcatagatcaa
gtttattgtccatggaatcagtgcaaagcacagattccctcgaagattaagattagccag
gttagcttcaaaaacatacgaggcacatctcaaactaaggaggccgtcaaacttttatgc
agcaatgaaataccatgtgagaatgtggagattactaatatagacctcgcataccaagga
agtgatggccctgcaacatcccaatgtactaatgtcaatcccaccatttcgggcaaacag
aatcctcctgcctgtactctaaaataa
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