Carya illinoinensis (pecan): 122306633
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Entry
122306633 CDS
T08745
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cill01003
]
122306633
Enzymes [BR:
cill01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
122306633
Glycosyltransferases [BR:
cill01003
]
Polysaccharide
Structural polysaccharide
122306633
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
122306633
NCBI-ProteinID:
XP_042975006
LinkDB
All DBs
Position
4:complement(4791834..4795636)
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AA seq
507 aa
AA seq
DB search
MCRMTGNDGKCSHGEECEMGFKFLSGVKVEKLKNSRVLRPRMKLFVIRGITIMFICASVA
QLITLGEMWGPRMFEGWPSCFSPSGLPLPGELPSAPYKVASPPKRAYKNNGYLRVSCNGG
LNQMRAAICDMVTIARYLNVTLIVPELDKTSFWADPSDFHDIFDVDHFVTSLRDEVRILK
ELPPRLKRRVGKRMLYSLPPISWSNMSYYHNQILPLVKRHKVVHLNRTDARLANNGLPLE
IQKLRCRVNFNALRYTSQIEELGRRVVGILREKGPFLVLHLRYEMDMLAFSGCTQGCNSY
EAEDLTRMRYAYPWWKEKVINSTLKRQQGLCPLTPEETALVLSALGIDRNVQIYVAAGEI
YGGERRMADLVAAFPNVVSKDTLLDPSELSYFKNRSSQMAALDYLVSLESDLFVPTYDGN
MAKVVEGHRRFLGFKKTILLDRKLLVGLIDQYNNGSLNWDDFSSVVKQTHANRMGSPKKR
VIVPSKPKEEDYFYANPYECLQLLDEP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagaatgacgggcaatgatgggaagtgtagtcatggggaggagtgtgagatggga
ttcaagtttttgagtggggtgaaggttgaaaagttaaagaattcgagggtattgaggcct
cgaatgaagcttttcgtaattcgggggataacgattatgtttatttgtgcttctgttgct
cagttgataacactgggagagatgtgggggccaagaatgttcgagggttggccttcttgt
ttcagtccgtcaggattgcctctgcctggcgaattgccttctgccccgtacaaagttgct
tccccaccaaaaagggcttataagaacaatggttatcttagggtttcctgcaatggagga
ctaaatcaaatgcgagcagcaatatgcgacatggttacaatcgccagatacttaaatgtc
acacttattgttccagaactggataaaacctccttttgggccgatccaagtgacttccat
gacatatttgatgtggatcatttcgtcacctcattgagagatgaggttcggatattgaag
gaattgccaccaaggctcaagagaagagttggaaagcgaatgctatattcgttgccaccc
attagttggtctaacatgtcctactaccataaccagattcttccactggtgaaaaggcac
aaagttgtgcatttaaatagaactgatgctcgattggctaataacggattacctctagag
attcagaagttgcgttgccgagtaaacttcaatgctttgaggtatacatcccagatagag
gagttaggtagaagagttgtcgggattttgagggagaagggcccctttctagtccttcat
ctcagatatgaaatggacatgttggctttctctggctgtactcagggttgcaacagttat
gaggccgaagatctcacaaggatgagatatgcatacccctggtggaaggaaaaagtaata
aactccacgttgaaaaggcaacaaggtttgtgccctttgacgcctgaggaaactgcattg
gttttgagtgcactaggcattgatcgcaatgttcagatttatgttgctgctggagaaata
tatggtggggaaagaaggatggctgacttggtggcagcttttcctaatgtggtctcaaaa
gataccctgctggatccctcggagttgagttatttcaagaatcgctcatcccaaatggca
gcattggattatcttgtttctctggaaagtgatctatttgttcctacatatgatggaaac
atggcaaaagtagttgaaggccatcgcaggtttttaggattcaaaaagactattctattg
gacagaaaacttctcgttggcttaatagatcagtacaacaatgggtcattgaactgggat
gacttctcttctgttgtaaaacaaactcatgccaatcggatgggaagcccaaagaaacga
gtaatcgttccgtctaaaccaaaggaggaagattatttctatgccaacccatatgagtgc
ttgcaactgctagatgaaccttga
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