Carya illinoinensis (pecan): 122306818
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Entry
122306818 CDS
T08745
Name
(RefSeq) heat stress transcription factor C-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122306818
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122306818
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GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
DUF6987
DUF4600
CC_Bre1
ADIP
Motif
Other DBs
NCBI-GeneID:
122306818
NCBI-ProteinID:
XP_042975270
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Position
4:complement(38405711..38407029)
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AA seq
332 aa
AA seq
DB search
MELNTIVAPFVMKTFHMVNDPRTDILITWGRANNSFIVLDPLEFSRRILPEYFKHSNFSS
FVRQLNTYGFRKVDTDRWEFANEWFLRGQKQLLRNIVRKKHGRINSSTQVKHEELDEDEL
VMEIARLKEEQKAMDEELRGMNKRLEATEKRPEQMMVFLRKVAEDPDILPRMMLQKERTR
WIITSEKKRRLMIPASSPSSSIKTEDEEEEGAQGLISSSPETGFEIGNLREQSSPETPTP
GWLSQRHEVIMGRSPTAQEPFGYVSFDSPFISASSATTGIGNSPALSPPERSISGYGNGS
NSSTVVSFFTEMGAGSPPPPYPFSLLGGGFQL
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaacaccatcgtcgcgccgttcgtcatgaagacttttcacatggtcaacgat
ccgaggactgacatcctgatcacctggggcagagctaacaacagcttcatcgtcctcgac
ccgttggaattctcgcggaggatcttacctgagtatttcaagcacagcaacttctccagc
ttcgttcgtcagctcaacacctatggattcagaaaggtggataccgatagatgggagttc
gcgaacgagtggtttcttcgtggccagaagcagttgttgaggaacatcgtgaggaaaaag
cacggtcggatcaattcgtctacgcaagtgaaacacgaagaattagatgaggacgaactg
gtcatggaaatagcgaggttgaaggaggagcagaaggctatggacgaagagcttcggggt
atgaacaagcgcttggaggccacggagaaacggcctgagcaaatgatggtattcctacgg
aaagtcgcggaagacccggatatccttccacgtatgatgctccagaaagaacggacgagg
tggatcattaccagcgagaagaagcggcggttaatgataccggcgtcgtcgccgtcttct
tcgataaagaccgaggacgaggaggaggaaggcgcccaggggctgatttcgtcatcgcct
gagactggctttgaaatcggtaaccttcgtgaacagtcgtctccggagactccgacaccg
ggttggttgagccaaagacatgaagttatcatgggtcggtctccgactgcacaagagcct
tttggctacgtctcttttgacagtccgtttatctcggcgtcatcagccactaccggaatt
ggaaatagtccggcgttgtcgccgccggaaaggagtatctcggggtatgggaatggtagc
aatagtagtacggtagtaagctttttcacagaaatgggggccgggagtccaccaccgcct
tatccgttttctctgttagggggtggctttcagctatag
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