Carya illinoinensis (pecan): 122306863
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Entry
122306863 CDS
T08745
Name
(RefSeq) chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
KO
K27707
chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122306863
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122306863
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
DUF3658
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
122306863
NCBI-ProteinID:
XP_042975321
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Position
4:3750904..3758751
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AA seq
762 aa
AA seq
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MPATLFRFPSHSYLTISFSLNPKPPQIPKHTPSSNPTIANNPDCSLSLKQPLSQSDAAVK
MPTAPWMNGPLLLPPHEVLDLSKRNSKKNLNNARVEKSDKALTEKVGVRGERAVNKIVRS
IEKLRMNDDSDETQKDSGKSGFGDCLEQLGEDDGSRYGRKMPWERDVGFALRRMKKEKAV
TEAELRLDKALLERLRDEAAKMRRWVKVKKAGVTQGVVDDIRTIWRRNELAMLKFDIPLC
KNLDRAREIVEIKTGGLVVWSKKDTLVVYRGCSYQLTSKNILKTRARLAGSQAAPYYETS
LPKWERNYEISLTHSNENGVDEKMRRSESEGANLPPGISSKRDLNHQPVSGSLYVRETER
LLDGLGPRFLDWWMDKPLPVDADLLPEVVPGYRPPFRLCPPRARAKLTNDELTYLRKLAH
PLPTHFVLGKNRKLQGLSASILKLWEKSLIVKISLKWGVPIMNNEEVALELKHLTGGVLL
LRNKFLIILYRGKDFLPCRVANLIAERETELKKYQLYEEGARVKAIEAVCMDNGSIENTS
SSGTLSESKYIQTEFSDLEKGNTEVDIKLEAEKQRLERELREQEQKLFILNIKIDKSMKE
LSKLTGGWAPTEMDADREMITAEERECYQKIGLKMDRCLELGRRGVFDGVIEGLHQHWKY
REVVKVITKQRLFHQVVYTAKFLEAESGGVLVSVKKLKEGHAIILYRGKNYRRPLKRVPE
NLLTKREALHKSLEMQRIGSLKFFAYQRQQAIMDLKCKLEDL
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgccggcaactctctttcgtttcccctcccactcgtacctcaccatctcattctcatta
aacccgaaacctccccaaatccccaaacacactccctcctccaaccccacaatcgccaac
aacccagactgctctctctctttgaagcaacctctttcgcaatccgatgccgctgttaag
atgcccacagctccgtggatgaatggcccccttcttctcccaccccatgaggttcttgac
ctctccaaacgcaacagcaaaaagaacttaaacaatgccagagtcgaaaagtccgataaa
gcgctgactgagaaagttggcgtgagaggtgaaagagcggtgaacaagatcgtcaggagc
atcgaaaagcttcgaatgaacgacgattcagatgaaacccagaaggattcaggtaaatct
ggatttggggattgcttagaacaacttggggaagatgacgggtcgagatacggaaggaaa
atgccttgggagagggacgtggggttcgctcttcggagaatgaagaaggaaaaagcagtg
actgaggcggaattgaggcttgacaaggcgttgcttgagaggctgagggatgaggccgct
aagatgaggcgatgggtgaaggttaagaaagccggggtgactcagggtgtagttgatgat
attagaacgatttggaggaggaatgagcttgccatgttgaaatttgatatccctttgtgc
aagaatttggatagagctcgagaaatcgtcgagatcaagactggaggcttggttgtttgg
agtaaaaaagatactcttgttgtctatcgagggtgcagttatcagctgacttcaaagaac
attttaaagacacgtgctaggcttgctggcagtcaagcagcaccttattatgaaactagt
ctgccgaagtgggaaagaaactatgaaatttctctaactcactccaatgaaaatggtgta
gatgaaaagatgcgtagaagtgaaagtgagggggcaaatttgccgccaggaatctcttca
aaacgggatttgaatcaccaaccagtgagtggatcactttatgtgagagaaacagagaga
ttattagatggcttgggacctcgtttccttgattggtggatggacaagcctttgcccgta
gatgcagatttacttcctgaagtggttcctggatataggcctccatttagactttgtcca
cctcgtgccagagcaaagctgacaaatgacgaattgacgtacttgaggaagcttgctcac
cctttacctactcattttgttcttgggaaaaaccgaaaacttcaaggcttatctgcatcc
atcttaaaactgtgggagaaaagtcttattgtgaagatttctctaaagtggggagtcccg
attatgaacaatgaggaagtggcattggaactcaagcatcttacaggcggagttcttttg
ctgcgtaataagtttctaataatactttatagaggcaaggatttccttccctgtagagtt
gcaaatttaatagccgaaagagaaactgagctaaaaaaataccaactttatgaagaaggt
gcacgggtgaaagcaattgaagctgtctgtatggataatggatcaatagaaaacactagc
tcatccggcactttatcagaatccaagtatatccaaactgagttcagtgacctggaaaaa
ggaaatacagaggttgatatcaaattggaagccgaaaaacaaagattggagagggaacta
agagagcaagagcaaaaacttttcattctaaacataaagatagataagtcaatgaaggaa
ttgtcaaagttgactggtggatgggcacctactgagatggatgctgaccgagaaatgata
actgcggaggagagagaatgttaccagaagataggactcaagatggatagatgtttagag
ctgggcaggcgtggggtctttgatggtgtaatagagggcctgcatcagcactggaagtac
agagaagtagtcaaggtgatcacaaagcagagattgtttcatcaagtcgtttatactgct
aaattcctggaagcagaaagcggaggagttctagtttcagtaaaaaagctaaaagaaggt
catgctataattctttaccgtgggaagaactacagaaggcccctaaaacgggtgcccgag
aatcttctaactaagagagaagcattacataaatcccttgagatgcagagaatcgggtcg
ttgaagttttttgcttatcaaagacagcaggcaatcatggatttgaaatgcaaattggaa
gatctgtag
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