Carya illinoinensis (pecan): 122306967
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Entry
122306967 CDS
T08745
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122306967
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122306967
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
PKMT_2nd
TetR_C_13
Motif
Other DBs
NCBI-GeneID:
122306967
NCBI-ProteinID:
XP_042975482
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Position
4:389674..400590
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AA seq
526 aa
AA seq
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MGSTFNPQILVEKLAKLNNSQASIETLSHWCIFHMNKAKQVVETWDQRFHGSPRDQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPNALHDVIENGDEYGRNAALRLIGIWEERKVFGS
RGQILKEGLVGGRHLENSNRNGKDLNFKLRPSAGNILEKIVSDYHAVYGGQLDEDVILSK
CSNAVSSLEKLDKEIGGDINSGQFHGSAFVEELRGQHAILRDCIEQLTAVESSRASLVSH
LREALQEQEFKLDRDRNQLQAAHSQSEQAGNICQQLLDRNKGRSPAEPSLREAQTSMAPH
SFIPGDREQSAPVMYTRQASFPEKSGQAEDDPRKSAAAAVAAKLTASTSSAQMLSYVLSS
LASEGVIGNPVKESPSAYPPEKRHKLENDQSSYIPQNLQQTPVPPYPHPESIQHSVSTSS
QQFTPNEPPPPPSSSPPPLPPLPPMPQYALTQYMQTAGSVTSLPYSYGVAQQQLPAMPSY
LTIGAPVNGIPTFTTPPTNSYQGFQGSEGNIYNQPSSMPMAPISRQ
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggagtacattcaatcctcagattttagtggagaagctagccaagctcaacaattca
caggcgagtatagagactttatcacattggtgtatattccatatgaataaagcaaagcaa
gttgttgaaacatgggatcagcggtttcatggttctccacgtgatcagagattagccttt
ctatatcttgcaaatgacatattgcagaacagtaggcgaaagggttcagagtttgttggt
gaattttggaaggttcttccaaatgctcttcatgatgtgattgaaaatggggatgagtat
ggaaggaatgctgcactccgattgataggtatatgggaggagagaaaagtttttggttct
agggggcagattcttaaggaaggactggtgggtggtaggcacttggaaaatagtaataga
aatggaaaggatttgaacttcaaattgagaccatctgctggaaatatattggaaaaaatt
gtttcagactatcatgctgtttatggtggccagttggatgaagatgttatattaagcaaa
tgcagcaatgctgttagcagtcttgagaaactagataaggaaattggtggtgatattaat
tcagggcaattccatggatctgcatttgtggaggagctcagagggcagcatgctatactg
agggactgtattgaacaactaacggcagttgaatcatccagagcaagtcttgtctctcat
ttaagagaagctctccaggagcaggaatttaagctggatcgagaccgtaaccaacttcag
gccgcacattcccaatcagaacaggcaggtaatatctgccaacagttactagatagaaac
aaaggtaggtcaccagctgaaccgagcctgagggaagctcaaacatccatggcacctcac
agctttataccaggagatagggaacaatctgctccagtaatgtacacacggcaggcttcc
tttcctgaaaaatctggccaggctgaggatgacccacgcaagtctgctgctgctgcagtg
gcagcaaagctaaccgcatcgacatcctcagcccagatgctctcttatgtcctatcctcc
cttgcatcagagggagtgataggaaatccagtgaaagaatccccaagtgcttaccctccc
gaaaaaaggcataagctcgaaaatgaccaatcctcttacatacctcagaatcttcaacaa
acgccagttcctccttacccgcatccagaatctatacaacacagtgtctctaccagcagc
caacagtttactccaaatgagccaccacctcctccctcatcgtctcctcctccattgcca
ccactaccacctatgccacaatatgcactaacccagtacatgcaaactgctggatcagta
accagtctaccatacagctatggggtggcccaacaacagctgcctgcaatgcctagttat
ttgacaatcggggctccggtgaatggaattcccacctttacaacacctcctacaaattct
taccagggctttcagggttctgagggtaatatctacaaccaaccatcgtccatgccaatg
gctccaatttctcgacaatag
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