Carya illinoinensis (pecan): 122307050
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Entry
122307050 CDS
T08745
Name
(RefSeq) valine--tRNA ligase, mitochondrial 1 isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122307050
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122307050
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122307050
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
122307050
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122307050
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
122307050
Prokaryotic type
122307050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Kri1
Motif
Other DBs
NCBI-GeneID:
122307050
NCBI-ProteinID:
XP_042975595
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Position
4:complement(6702366..6724447)
Genome browser
AA seq
1114 aa
AA seq
DB search
MLGFHARVLQKPLLLLNLANHIRSLHRSPFSQVYSLRSFSTTNVMADSERKPEIDGAEKN
ERLGDSEKTLSIEDLEKKKKKEEKAREKELKRQKALEKAAKLQAQQASIPLKRNDKKTVK
RGGNEENPEEFVDPETPFGEKKQMSHQMAKQYSPSAVEKSWYAWWEKSGFFVADAKSSKP
PFVIVLPPPNVTGALHIGHALTAAVEDTIIRWRRMSGYNTLWVPGVDHAGIATQVVVEKK
IMRESKLTRHDIGREKFVSEVWNWKNKYGGTILQQLRRLGASLDWSRECFTMDEKRSKAV
TEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVEIKERTPLKVPGYEKPVEFGVL
TSFAYPLEGELGEIVVATTRVETMLGDTAIAIHPDDPRYSHLHGKFAIHPFNGRKLPIVC
DAILVDPKFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINSNGGSEFVGLPRFK
AREAVTEALQKKGFYRGAKNNEMRLGVCSRTNDVVEPLIKPQWYVSCNSLGRQALDAVMD
EENRRIEIIPKQYSADWRRWLENIRDWCISRQLWWGHRIPAWYVSLEDDELKEVGAYNDH
WVVARNEEEAQEEASRLYNGRKFHLSQDPDVLDTWFSSGLFPLSVLGWPDDTEDLKTFYP
TSVLETGHDILFFWVARMVIQGMKLGGDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLE
VINGISLDGLHKRLEEGNLDQKELVVAKEGQTKDFPNGISECGADALRFALIAYTAQSDR
INLDILRVVGYRQWCNKLWNAVRFAMSRLGDDYVPPTNVKPNVLPFSCQWILSVLNKAIS
KTVASLESYEFSDASSTVYSWWQYQLCDVFIEAIKPFVAGNDPKFDSARSLARDTLWLCL
DNGLRLLHPFMPFVTEELWQRLPSSKDSARIESIMICEYPSAVECWTNERVEYEMDLIDS
VVKSLRSLANERRERRPAFVLCRSDAVAEIISSHQLEITTLANLSSLKVISENDAAPVGC
AVSVVNENVSVYLELQGTLSPEAELEKIRKKTDEIRKQHEKLTKMMNASGYKEKVPSHIH
QENVAKLAALMQEVLSLEEAGQHIEAQAASNQQD
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgctgggattccatgccagggttttgcaaaagccgctactcttgttgaaccttgcaaac
catatccgcagcctacataggtcaccattttcacaagtttattctctccgatctttctca
acaacaaacgtaatggcggattcagagagaaagccggaaatagatggtgctgagaagaac
gaacgactgggcgattcggagaaaacgctcagtatagaagacctcgagaagaaaaagaaa
aaagaagagaaggcgagggagaaagaattgaaaaggcaaaaggctttagagaaagctgct
aaacttcaggcacaacaagcatcaattcctctgaaaagaaatgacaagaaaacagtaaag
cgtggtgggaatgaagagaaccctgaggagtttgttgatccagaaacaccttttggtgag
aagaaacaaatgtctcatcaaatggcaaagcagtacagtcctagtgcagtagagaaatcg
tggtatgcatggtgggagaaatcgggtttctttgttgcagatgcaaaaagctccaagccc
ccgtttgttattgtcttgccaccaccaaatgtaactggtgccctccatataggtcatgca
cttactgctgctgtagaggataccattattcgctggcggagaatgtctggatacaatacc
ttgtgggtccctggggtggaccatgctgggattgccacgcaggttgttgtggaaaagaag
ataatgcgtgaaagcaaattgactaggcatgatatcggtcgcgagaaatttgtatctgaa
gtctggaattggaaaaataagtatggtggaaccattttgcaacagttgcgccgtttgggt
gcctctttagattggtctcgtgagtgctttacaatggatgagaaaagatcaaaggctgtg
actgaggcttttgttaggctttacaaggaaggccttatttatagagatcttcgcctagtg
aattgggattgcgtgttgcggactgcaatatctgacattgaggtagactatgttgagatc
aaagaaaggactccactaaaggttccaggatatgagaaacctgtggaattcggtgtttta
acttcatttgcctaccctttggaaggtgagctgggtgagattgttgtggccaccactagg
gtggagactatgcttggagatactgctattgctatacatccggatgacccacggtacagt
catcttcatggaaaatttgccattcatccatttaatggacgaaagcttcccatagtttgt
gatgcaattcttgttgatccgaagtttgggactggtgctgtcaagattacccctgctcat
gacccgaatgattttgaggttggcaagcgccacaatcttgagttcatcaacatttttact
gatgatggaaaaataaacagcaatggcgggtcagagtttgtagggttgccgcgttttaaa
gctcgagaggcagttactgaagcattacaaaagaagggcttttatagaggtgctaaaaat
aatgagatgcggctgggcgtttgttcaagaaccaatgatgttgtggagccacttataaaa
cctcaatggtatgttagttgcaatagtttggggaggcaagctcttgatgctgtaatggat
gaagaaaacaggaggatagagatcatcccaaaacagtattctgctgactggagaaggtgg
cttgaaaacattcgtgattggtgcatctcaaggcaactttggtggggtcatcgtattcct
gcatggtatgtctcactggaggatgatgagctaaaggaagttggtgcttacaatgaccac
tgggtggttgcaagaaatgaggaagaggctcaggaggaggctagccgattgtataacggg
aggaagtttcatttaagtcaagatcccgatgtgcttgatacatggttttcttctggtctt
tttccattgtctgttttgggctggcctgatgatactgaagatctgaagacattttatcca
acttcagttttggaaactggccatgatattctctttttctgggttgctcgcatggtgatt
caaggaatgaaattgggaggtgatgtaccttttcgaaaggtttatttgcacccaatgatt
cgtgatgcgcatgggcgcaagatgtctaagtcattgggaaatgtcattgatccacttgaa
gtaataaatgggatatccctggatggtcttcataagaggctagaggagggtaacttggat
cagaaagaactggttgttgccaaagaggggcagacaaaagactttcctaacggtatttcc
gagtgtggtgctgatgctcttcgctttgcccttatagcttacactgcccagtcagataga
ataaacttggatatcctaagagtggttgggtatcgtcaatggtgtaataaattgtggaat
gctgtacgatttgccatgagcaggctgggagatgattatgttccacccacaaatgtaaaa
ccgaatgtcttgccatttagctgtcagtggatactctctgtattaaacaaagccatatcc
aaaactgtagcttctctggaatcgtatgagttctcagatgcatcaagtacagtgtattcc
tggtggcagtaccaactgtgtgatgtttttattgaagcaattaagcctttcgttgctggg
aatgatccaaaattcgactctgcaaggagtttggctcgagatacactttggttatgtctt
gacaatgggttgcgattgcttcatccttttatgccgtttgttacagaagaattgtggcag
cgccttccttcatcaaaggacagtgcaaggatagaatctattatgatatgcgagtaccca
tcagctgttgagtgctggacaaatgaaagggtggagtatgagatggatcttatagattct
gttgtgaaatctctcaggtctcttgcaaatgaaagacgtgagaggcgtccagcttttgtg
ctctgccgaagtgatgcagttgcggaaattattagcagccatcaactggagattactact
cttgccaatttatcgtctttgaaggtaataagtgagaatgatgctgctccagttggatgt
gcagtatcggttgtaaatgaaaacgtttctgtttatcttgagcttcagggaaccctttct
cctgaagcagaacttgaaaagatcaggaaaaagacagatgagattcggaagcaacacgag
aagctaacaaagatgatgaatgcttctggatacaaagaaaaggtgccttcgcacattcat
caagagaatgttgcaaagctagcggccctcatgcaggaggttttgtctctcgaagaagca
ggccaacatattgaagctcaagcagcaagcaatcaacaggattag
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