Carya illinoinensis (pecan): 122307102
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Entry
122307102 CDS
T08745
Name
(RefSeq) chloroplastic group IIB intron splicing facilitator CRS2-A, chloroplastic-like
KO
K27711
chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122307102
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122307102
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Gene cluster
GFIT
Motif
Pfam:
Pept_tRNA_hydro
Motif
Other DBs
NCBI-GeneID:
122307102
NCBI-ProteinID:
XP_042975668
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Position
4:complement(3715124..3719542)
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AA seq
247 aa
AA seq
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MLYAVSAPNSCISYPRSPSCPHFLRKRSVPARLSIRASLPDNNNGAKMEYTPWLIVGLGN
PGNKYHGTRHNVGFEMIDSISRAEGISMNTIQSKTLIGIGSVGEVPILLAKPQAYVNYSG
EAVGPLAAYYQVPLRHILLVYDEMSLPNGVLRLQPKGGHGHHNGMRSVMEHLDGCRQFPR
LGIGIGNPPGTMDLKAFLLQKFSSVERKQIDAALEQGVEAVRSLVLHGFSERINRFNLGQ
KFKYHKV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgttatatgcggtctcggccccaaattcttgcatatcgtatccaagaagccccagttgc
cctcattttctcagaaagcgttccgttccagcgaggctttctatacgtgcttcattgccg
gataataacaatggtgcaaaaatggagtatactccttggttgatcgttggattgggaaac
ccgggtaataagtaccatggtacaaggcacaatgttggttttgaaatgatcgatagcatt
tcacgagcagagggaatatcaatgaacacaatacagtcaaagaccttaattggaataggt
tccgttggcgaggtgccgattttattggcaaagcctcaagcttatgtgaattacagtgga
gaagcagttggaccacttgccgcatattatcaagtaccactgcgtcatattttattggtt
tatgatgagatgagcttaccaaatggtgttttgaggcttcagccgaaaggaggacatggc
catcataatggaatgaggagcgtaatggagcatttggatggttgtcgacaatttcctcgg
ttgggcataggcatcggaaatccccctggtaccatggacttaaaagcttttcttctccag
aagtttagttcagtagagcgcaaacagattgatgcagcccttgaacaaggggttgaggcc
gtcaggagcctggtactccatggttttagtgaaagaatcaatagatttaatttggggcag
aaattcaagtatcataaggtctga
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