KEGG   Carya illinoinensis (pecan): 122307138
Entry
122307138         CDS       T08745                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122307138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122307138
   03400 DNA repair and recombination proteins [BR:cill03400]
    122307138
Spliceosome [BR:cill03041]
 Complex B
  Other components
   Prp19 complex
    122307138
 Complex C
   Prp19-CDC5 complex
    122307138
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122307138
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 122307138
NCBI-ProteinID: XP_042975746
LinkDB
Position
4:complement(9034514..9049163)
AA seq 1011 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDDNYEPGEDPR
KLRPGEIDPNPESKPARPDPIDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNSEIPFEKKPPPGFYDVSDEDRPVEQAQFPT
TIEELEGKRRMDVETQLRKQDIAKNKIAQRQDAPSAILQANKLNDPETVRKRSKLMLPAP
QISDHELEEIAKMGYASDILVGGEELSEGSGATRALLANYSQTPQPGMTPLRTPQRTPAG
KGDAIMMEAENLARLRESQTPLLGGQNPELHPSDFSGVTPKKREIQTPNPLLTPSATPGG
AGLTPRIGMTPSRDGYFNMTPKGTPVRDELHINEDMDVQDGAKLDQRRQADLRRNLRSGL
INLPQPKNEYQIVMQPVLEDNDEPEVKIEEDMSDRIAREKAVEEARQQALLRKRSKVLQR
ELPRPPAASLDLIRNSLIRADEDKSSFVPPTSIEQADEMIRKELLSLLEHDSAKYPLEKK
LTKEKKKSVKHSANGPGYVPEIDGFEEDELKEADTLIGEEARYLRLAMGHENQSLDEFVE
AHSTCLNDLMYFPTRNAYGLSSVAGNMEKLAALQNEFENVKKKMDGDKAKAESLENKVKV
LTHGYETRAKTALWPKIATTLKQMDTAATELECFRALQKQEQLAASHRINSLWEEVQKQK
ELERTLQMRYGDLVAELDRTQHLMEKYRVQAEEQEAIAAKNHTLELAKAAEDQTLAQSIL
MDAPILSTDPIGSSHDGNAVQPMDAKQEHASPKSDMDVDAQNEHPQLCMVENLPTSSPTA
VEQETTTPVQGNTFEGTVIQLSPPGRDNPQAVPSLVTVTDSGDGAAGANITTEVTKENPY
SGDQQNVAEAVSLDGGLSKQEDCVPETAGNDSCSGGDAMQVSGGEGGHADN
NT seq 3036 nt   +upstreamnt  +downstreamnt
atgaggataatgataaagggaggcgtctggaagaacacggaggatgagatcctcaaggcg
gctgtgatgaagtatgggaaaaatcagtgggcccggatctcgtctctcctcgttcgtaag
tccgccaagcagtgtaaggctcgttggtatgagtggctcgacccttccataaaaaagacc
gagtggaccagagaggaggatgagaaactgctacatcttgcaaaactcatgcccacacag
tggagaacaattgccccgattgttggtcgtactccatcccaatgccttgagcggtatgag
aaactcctcgatgcagcttgtgctaaggatgacaactatgaaccaggtgaggaccctcgg
aaattgcgtccaggagagattgatccaaaccccgagtcgaagcctgcacgtccagatccc
attgacatggatgaggatgaaaaggaaatgctttctgaggcacgagcccggttagccaac
accaagggaaagaaggcaaagaggaaagccagggagaaacaacttgaggaggctaggagg
cttgcttctttacagaaaaggagagaactgaaggctgccggaattgacactaggcaacgc
aaaaggaaaaggaagggcatagattataactccgagattccatttgagaagaagcctcct
ccaggcttttacgatgtttctgatgaggatagaccagtggagcaggcccagttccctacc
acaattgaagaactggaagggaaaaggagaatggatgtggaaacacaactaagaaagcaa
gatattgcaaagaataaaattgcacaaaggcaggatgccccatcagctatactacaagcc
aacaagttgaatgatccagaaacggtcagaaagaggtcaaaacttatgcttcctgcacca
cagatttcggaccatgaattggaggaaattgcaaagatgggttatgctagtgatattctt
gtgggtggtgaggaactttctgaagggagtggtgcaacacgtgctcttcttgcaaattat
tcccagacaccacagccaggaatgacacccctacgaactccacaaagaacaccagctggt
aagggtgatgctattatgatggaagcagaaaatctagccaggttgagggagtctcagaca
ccattattagggggacagaatccagagttgcacccttcagatttttcaggggttactcct
aagaaaagggagatccaaacgccaaaccctctgctaactccttcagccactcctggaggt
gctggtcttactcctagaattggcatgacaccatcaagagatggatattttaatatgacc
ccaaagggaactcctgtcagggatgagcttcatattaatgaagatatggatgtgcaagat
ggtgccaaacttgatcaaagaaggcaagctgatttgagaaggaacttgcgatcaggtcta
atcaatcttccacagccgaagaatgagtaccagatagttatgcagccggttttagaagat
aatgatgaaccagaggtgaagattgaagaggatatgtctgataggatagctagagaaaag
gctgtggaagaggcacgtcagcaggcattacttaggaagagatcaaaagtactgcagagg
gagctccctagacctcctgctgcttcattggatctaattagaaattctcttattagagca
gatgaagacaagagctcctttgttcctcctacttccattgagcaggctgatgaaatgata
agaaaggagcttctaagcttactagagcatgatagtgctaagtatccacttgaaaagaaa
ctgaccaaggagaaaaagaaaagtgtcaagcactctgcaaatggacctggttatgtccct
gagatagatggttttgaggaagatgagctgaaagaggctgatactttgataggggaagag
gctcggtatcttcgcctggcaatggggcatgaaaatcaatcccttgatgaatttgttgaa
gcacacagtacttgcctaaatgatctcatgtactttcctacccgtaatgcttacggtctc
tcaagtgttgctggaaacatggagaagcttgcagctttgcagaatgaatttgaaaatgtg
aagaagaagatggatggtgataaagccaaggcagaaagccttgagaataaggtcaaagtt
ctcacacatggttatgagacacgagctaaaacagctctctggccaaagatcgcgacaacc
ctcaaacagatggacactgctgcaacagaacttgagtgtttcagagctttacaaaagcaa
gagcaattagcagcttcacaccggataaatagtctctgggaggaagttcagaagcaaaag
gagctggaacgaactttacagatgcgatatggagatcttgtggcagagttagataggaca
caacacctcatggagaaatacagagtacaagcagaagagcaagaggcgattgcagccaag
aatcatacccttgagttggctaaggctgcagaagatcagactcttgcacagagcatcttg
atggatgcacctatcctgtctacagatccaattggatcatcacatgatggaaatgctgta
cagccaatggatgccaaacaagaacatgcaagtccaaaatctgatatggatgtcgatgcc
cagaacgagcatccacaactgtgcatggttgaaaatttgcctactagtagccctactgct
gtggagcaagagaccaccacaccagtacaaggtaacacttttgaaggtactgttattcag
ctctcccctccaggtagagataaccctcaggcagttcccagcttggtgacagttactgac
tcaggtgatggggctgctggagccaatataactactgaggttactaaagaaaatccatat
tctggtgatcaacaaaacgtagcagaagccgtgagccttgatggtggcttgagcaagcaa
gaagattgtgtcccagaaaccgctggcaatgatagttgctctggcggggatgccatgcag
gtctctggtggtgaaggggggcatgcggataattaa

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