Carya illinoinensis (pecan): 122307171
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Entry
122307171 CDS
T08745
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122307171
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122307171
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
122307171
NCBI-ProteinID:
XP_042975788
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Position
4:9813767..9826854
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AA seq
453 aa
AA seq
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MTEPSKVLHVRNVGYEITENDLLQLVQPFGVVTKSVMLRAKNQALIQMQDVGSAVNVMQY
YANIQPSVRGRNVYIQFSSHQELTTVDQNPQGRNQYITRNFQDAPPNRILLVTIHHMLYP
MTVEVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQSHQSALSAIDALQGRNIYDGCCQLD
IQFSNLSELQVNYNNERSRDFTNPALPSEQKGRSSQSGYGDAGGMYGLQPPATRAVAFPQ
MGDAAAITAAFSGSLPPGISGTNDRCTVLVSNLNPDKIDEDKLFNLFSLYGNIVRIKLLR
SKPDHALIQMGDGFQAELAVHFLKGALLFGKQLEVNFSKYPNITPAPDTHDYSNSNLNRF
NRNAAKNYRYCCSPTKMIHLSTLPQEITDDDLVTHLEEHGTIVNTKIFEANGKKQALVLF
ETEEEAAEALVCKHATSIDGSVIRISFSQLQSI
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgacagagccttcaaaggttcttcatgttcgaaacgtgggttacgagataactgagaat
gatttgcttcaactggttcaaccttttggggttgttactaaatcagtgatgcttcgtgca
aagaaccaggctcttatccagatgcaggatgtgggatccgctgtcaatgtaatgcaatac
tacgcaaatattcaacctagtgttcgggggagaaatgtttacattcagttctcttcacat
caagaactgactacagtggatcagaaccctcaagggcgcaaccagtatatcacgaggaac
tttcaggatgcaccgcctaatcgaattctcttagtcactattcatcacatgctatatcca
atgacagtggaagtgcttcatcaagtgttttctccttatggttttgtggagaagattgtc
acatttcagaagtcagctggttttcaagcccttatccagtaccagtcacaccagagtgcc
ctttctgcaattgatgcacttcagggacgaaatatatatgatggctgttgtcagctggat
attcagttttcaaacctttctgagctacaggtgaactacaataatgagcgctccagggat
ttcacaaacccagctctaccttcagaacaaaagggcagatcctcccaatcagggtatggt
gatgcggggggcatgtatggtcttcaacctcctgcaactagggcagtagcatttccacag
atgggagatgctgcagccatcacagctgcctttagtgggagcctgcctcctggaataagt
ggcacaaatgacaggtgcactgtcttggtctctaacctaaatcctgataaaattgatgag
gataagttgttcaatttattttccctttatggaaacattgtgaggattaagcttctccgt
agtaaaccagatcacgcccttattcaaatgggagatggattccaggcagagttggctgtg
cacttcttgaagggagcattgctctttgggaaacagctggaggtaaacttctccaagtat
ccaaatataacaccagccccagacacccatgattactccaattcaaaccttaaccgcttt
aaccgtaatgctgccaaaaactaccggtattgctgttcaccaaccaagatgatacacctg
tccaccctccctcaggaaattacggatgatgacttggtgacacacctggaggagcatggg
actattgttaacaccaaaatctttgaggcaaatgggaagaaacaagccttagttctgttt
gagactgaagaggaagccgccgaggcacttgtctgcaagcatgccacctctattgatgga
tcagttatccgaatctccttctcccaattgcagtctatctag
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