Carya illinoinensis (pecan): 122307182
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Entry
122307182 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122307182
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122307182
Enzymes [BR:
cill01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
122307182
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122307182
Prokaryotic type
122307182
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Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
122307182
NCBI-ProteinID:
XP_042975805
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Position
4:2527856..2533460
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AA seq
542 aa
AA seq
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MGKSLTLTYVSSLLFRPRSMITSSTRVISLSLPKPIDNTLFSLSPSSLFFSTTSTQFPLQ
YDMIINRPTQSQPRHTPARVRKSNPDYSPEFDSPEKPVSEQGFEDWVDEKLLSESTTNRP
SSEKLEMDKSMRKYYNKRRKRMYGSDSDSDSKRHEEGFVELKPEVVEFNRLHEREEELYF
YDTFAYPWEKEKHYKMVYQLEKKYFPDHCLDKAFLEPGESNANNAKGKVKKKVGVKSGEK
NGGDGGEGGDSKKLVFFDEEGEQKGREEIAKKDASKDVTEKKVEEFFKCLNKVPKKNGEV
VNGEPYLVTRSMELPPRWDSPCGTVILVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDP
MATGLLIVCVGKATKLVERYQGMIKGYSGVFRLGEATSTWDADSPVIQRELWEHIKDEEI
KKTAASFCGEIWQVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFRFDIERSLDDRQ
NLIFRVTCSKGTYIRSLCADFGKALGSCAHLTALRRDSIGEYSADDAWDFKELEESITKS
YF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtctctcaccctaacttacgtatcctcccttctcttccgtcccagatccatg
attacttcctcgacgcgagtaatctctctctcactaccgaaacctattgacaataccctc
ttttcgctatctccctcttcgctttttttctccaccacgtccacccaatttcctcttcag
tacgatatgatcatcaaccgcccaactcagtcccaacctcgccacacccccgcccgcgta
cgcaagtcaaacccagactactcacccgagtttgattcaccagagaaacccgtttcggaa
caaggcttcgaggactgggtggatgaaaagctgttatcagagagcacaacaaaccgaccc
agttcggaaaaattggaaatggacaagtctatgaggaagtactacaataagaggaggaag
aggatgtatgggtcggattcggattccgatagtaagcggcacgaggaggggtttgtggaa
ctgaagcctgaggtggtggagtttaatagattgcatgagagagaggaggagttgtatttt
tacgatacttttgcttatccatgggagaaggagaagcattacaagatggtctatcagttg
gagaagaagtattttcctgatcattgcctcgacaaggcatttcttgaacccggcgaatcg
aatgcaaataatgcgaaggggaaggtaaaaaagaaagttggtgttaagagtggggagaag
aacggtggggatggcggcgagggaggggatagtaagaagttggttttctttgacgaagaa
ggagaacaaaagggtagggaggaaatagcaaagaaggatgcgagtaaggatgtcacggag
aagaaggtagaggagttctttaagtgtttgaataaagttcccaaaaagaatggtgaagtc
gtgaatggggagccataccttgtgacgaggagtatggagcttccgccaagatgggatagt
ccgtgcggcacggtgattttagtgaacaaacccaaaggatggacctcatttacagtttgt
ggaaagctacgtcgcctagttaaagtgaagaaggtagggcatgctggaacccttgatcca
atggcaactggtttattaattgtatgtgttggtaaagccactaagttggtagaaagatat
caaggtatgattaagggctatagtggggttttccgactaggagaggccacttcaacttgg
gatgctgattcaccggtcattcagcgggagctttgggagcatatcaaagatgaggagata
aagaaaactgctgcctccttttgtggggaaatttggcaagttcccccgatgttctctgct
atcaaagttggaggagaaaagatgtatgagaaagcaagaagaggagaaagcattgaactt
tcacctagaaggatttcaattttccggtttgatattgagcgtagcttagatgacaggcaa
aatctgattttccgggtgacatgctccaaaggtacatacatacgttcactatgtgcagat
tttgggaaggctcttggcagttgtgctcatttaactgctcttcgaagggattcaattggc
gaatattcagcagatgatgcatgggacttcaaagagctggaagagtcgattaccaaaagt
tatttctaa
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