Carya illinoinensis (pecan): 122307245
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Entry
122307245 CDS
T08745
Name
(RefSeq) CLP protease regulatory subunit CLPX1, mitochondrial-like
KO
K03544
ATP-dependent Clp protease ATP-binding subunit ClpX
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cill03110
]
122307245
Chaperones and folding catalysts [BR:
cill03110
]
Heat shock proteins
HSP100
122307245
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
AAA
ClpB_D2-small
AAA_22
AAA_5
Mg_chelatase
RuvB_N
MCM
Sigma54_activat
AAA_14
Sigma54_activ_2
AAA_16
IstB_IS21
AAA_7
ABC_tran
AAA_28
T2SSE
nSTAND3
DEAD
TsaE
AAA_18
AAA_24
Terminase_6N
RNA_helicase
NACHT
AAA_29
AAA_30
ResIII
AAA_33
Motif
Other DBs
NCBI-GeneID:
122307245
NCBI-ProteinID:
XP_042975927
LinkDB
All DBs
Position
4:complement(704954..713199)
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AA seq
699 aa
AA seq
DB search
MSGILRWRSKVERMTLLLTSDTFLSHHYPHRFTQLSSISTHLNHLHFGTQRRRESLIGVQ
ERYKWGHSGSDSDGLNHHNIRKIRADANCPRCFKHMDLLFSFPNRHNLAPPVPLGALDVP
DDAHANTGASANLCPNCKRAYYFRPDRIVPLQGSFVEIGRLNNTPTRPRNSNGADENGNG
GGDEHNRNNNTIANTNSRFIASFWDTLRSYSSDVGGDPPENWAPPPSGNDLAVHTPPGPP
FTPGVNVVRASGPGGGGGGEGRGSGDKSGWGGSNLGKNLPTPKEICKGLNKFVIGQERAK
KVLAVAVHNHYKRIYHASLQKGSGAESGIPERIDDDDNVELEKSNVLLMGPTGSGKTLLA
KTLARFVNVPFVIADATTLTQAGYVGEDVESILYKLLAAAEFNVQAAQQGMVYIDEVDKI
TKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGG
AFVDLEKTISERRQDSSIGFGAPVRANMRTGGVTDAAVTSSLLESVESADLIAYGLIPEF
IGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLFSMNNVKLHFTEKALRLIAQKAMA
KNTGARGLRSILESILTEAMYEIPDVKTGNDRIDAVVVDEESVGSADTPGCGGKVLRGDG
ALEHYIEETKLKDSMDNVEAAEGEPQEGESELSSRAMSM
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaattttgcgatggaggagcaaggtggagcgaatgacgctgttgctgacctca
gataccttcctatcccaccactacccccaccgcttcactcagttgtcctccatctcgacc
caccttaaccacctccatttcggcactcaacgccggcgcgaatccctcatcggagtccag
gagcgttacaagtggggccacagtggctccgactccgatggcctcaaccatcacaatatc
cgtaagattcgtgcggatgccaattgcccccgctgcttcaagcacatggatcttctcttc
tccttccccaatcgccacaatttagctcctccggttcctctaggtgcccttgatgttccc
gatgatgctcatgctaacaccggagcttccgccaatctctgccccaattgcaaaagggct
tactactttcgccccgacaggattgtccctctccagggcagcttcgtcgagattggcagg
ctcaataacacacctacaagacccaggaacagcaacggggctgatgaaaatggtaacggc
ggaggagacgagcataatcgaaataataacactattgctaacacaaatagtaggtttata
gcctcgttctgggacactttaagatcctacagttctgatgttggtggggacccgccagag
aattgggctcccccgccttcgggaaatgacttggccgtgcatactcctcctggaccgcct
tttacgcctggggttaatgtggttcgggcgtcagggcccggtggtggcggcggcggtgaa
ggtagaggtagcggagacaaaagcggatggggcgggtcgaatttgggcaagaacttgccc
acgccaaaggagatctgcaagggtctcaacaagtttgttattggccaagagagagccaaa
aaggtgcttgcagtcgctgttcataaccactataaaagaatatatcatgcatccctgcaa
aaagggtctggagcggaatcaggaattccagagagaatagatgacgacgataatgtggag
ctagaaaagagcaacgtccttttgatgggtccgactggctcagggaagacgctacttgct
aaaacactagctcgatttgtgaatgtgccctttgtcatagctgatgcaacaactttgaca
caggcaggttatgttggagaagatgttgaatcaatcttgtacaaattacttgcggcagct
gagttcaatgtacaagcagctcaacaagggatggtttacatagatgaagtggacaagata
actaagaaggctgagagcttaaacattagcagagatgtttctggtgagggcgtccaacag
gcattattgaaaatgctagaaggaacaatagttaatgttcctgagaagggggcaaggaag
catcctcggggtgataacatacagatagatacaaaagatatcctttttatatgtggtgga
gcatttgtcgatcttgagaaaacgatttcagagaggcggcaagactcatcaattggtttt
ggggcgcctgttcgtgcaaacatgagaactggtggagtaaccgatgctgcagtaacatca
tccttacttgagtcggttgaaagtgctgatcttattgcatatggtctcataccagaattt
attggacgttttcctattttagttagtttgtcagctttaactgaggaccaacttgttcag
gtcctcactgaaccaaaaaatgctcttggtaaacagtacaagaaattgttcagcatgaac
aatgtgaagctacattttactgagaaagccttgagactgattgcccagaaagcaatggca
aagaatactggtgccaggggcttaaggtccatactggaaagcattcttacagaagccatg
tatgagattccagatgtgaagacaggcaatgatagaatagatgctgttgtggttgatgag
gagtctgtgggttcagcagatacccctggatgtggagggaaagttcttcgtggagatggt
gctttggagcattacatagaagaaacgaagttgaaggattcaatggataatgttgaggcg
gctgagggagagccgcaggaaggtgaatcagagctgtcatcaagagccatgagcatgtga
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