Carya illinoinensis (pecan): 122307259
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Entry
122307259 CDS
T08745
Name
(RefSeq) nijmegen breakage syndrome 1 protein isoform X1
KO
K10867
nibrin
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122307259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cill03032
]
122307259
03400 DNA repair and recombination proteins [BR:
cill03400
]
122307259
DNA replication proteins [BR:
cill03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
122307259
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
122307259
BRCA1-C complex
122307259
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FHA
BRCT
PTCB-BRCT
Nbs1_C
Yop-YscD_cpl
DUF7526
Motif
Other DBs
NCBI-GeneID:
122307259
NCBI-ProteinID:
XP_042975952
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Position
4:645956..659566
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AA seq
513 aa
AA seq
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MVWGLFPVDPLSGEDGYYVFASGTYKVGRKGCEVIITKDKGVSRIHAEIVVDAMTSSILS
KVRVRDCSKYGTFIDKNLGQTEKVHELPNKEATLGDGDLVRFGTGTANYRFSFIPLIFFV
CSESFLSNQPLQDKISSIGALVTQSLIQECTHVLVDQLMLVNDDIIDAVVSKKPIVLDSW
VEFVAEKKIRSEIPSFSLYAPMLTVGGVSVKVADPKSRENCLEGYTFLLGSTHMYKFRDR
LQSLLEVGGAKIVSIKGFCLSSQDTEHGDNDRMVCVVPGGSTEEYDQFQKLSSLSRVNEM
DLVCAILSGGMDPSILISPCILVSSSCSTEETVVADSDVEEETATSIHANATVCDDEAIK
FVSKAETSMDHAAAKSEDAHVMSGIDGSYGMTVGRDKVDETECGNADIIYSQDLVVQYMD
LPSRANTIANNGVLNFKHFRKTNTQSGNSFNNLIPFSKYPFKDSDYGSEEVVESVMAEKK
RKQMEAIAEDLFNNEKGRRRGIAGSLRGLLTQV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggtttggggcctttttcccgtcgatcctctctcaggggaagatggttactatgtcttt
gcttcaggaacgtacaaagtaggtcgcaaaggttgtgaagtaattattaccaaagacaaa
ggcgtatctcggatccatgcagagatagttgttgatgccatgacttccagtattttgtcc
aaagttcgtgttagagattgctccaagtatggaacatttattgacaagaatcttgggcaa
acggaaaaagttcatgagctcccaaataaggaagcaactttaggagatggggacctggtg
cgttttggaactggtactgcaaactacaggttttctttcatcccactgatattttttgtg
tgctcggagtccttcctttcgaatcaaccccttcaagacaaaatttcatcaattggagct
cttgttactcagagtctgattcaagaatgcactcatgtgcttgttgatcaactcatgctg
gtgaatgacgatatcattgatgctgttgtatcaaagaaacctattgttcttgatagttgg
gttgagtttgttgcagaaaagaaaattcgctctgaaattcctagtttcagtttatatgcc
ccaatgctgacagtaggaggagtgtcagtcaaagttgcagaccctaaatctcgtgaaaac
tgtttggaaggatacacttttttgttggggtcaacacacatgtacaagttcagggatcga
ttgcaatccttattggaagtgggtggcgcgaagattgtttctataaaaggattttgtttg
agtagccaggacacggagcatggagacaatgatcgcatggtttgtgttgtccctggagga
tcaacagaggagtatgatcaattccaaaaactcagttcattgtcgagagtaaatgagatg
gatttagtatgtgccattttatctggagggatggatccatccatattgatatcgccatgc
attcttgtttcatcttcctgctccacagaagaaacagtggtagcagattctgatgtagag
gaggaaacagctacatcaattcatgcaaatgccacagtctgcgatgatgaagccattaaa
tttgtgagcaaagctgaaacatccatggatcatgctgctgccaaatcagaggatgcccat
gttatgagcggcatagatggtagttatggtatgacagtgggaagagacaaggttgatgag
accgaatgtgggaatgctgatataatctacagccaagatttagttgtgcagtatatggac
ttaccttctcgtgccaatactattgccaacaatggagttctaaatttcaaacacttcagg
aagacaaatacccaatctgggaatagcttcaacaatttaatcccgttttcaaagtacccg
ttcaaagattctgactacgggagtgaggaagtggttgagtcggttatggctgagaaaaag
cgaaagcaaatggaagccattgcagaagacttatttaacaatgagaaggggaggcggcgt
ggcatcgctggttctctccgtgggcttcttactcaagtttag
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