Carya illinoinensis (pecan): 122307262
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Entry
122307262 CDS
T08745
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122307262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122307262
03012 Translation factors [BR:
cill03012
]
122307262
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122307262
Translation factors [BR:
cill03012
]
Eukaryotic type
Release factors
122307262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122307262
NCBI-ProteinID:
XP_042975957
LinkDB
All DBs
Position
4:complement(678630..682109)
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AA seq
436 aa
AA seq
DB search
MADAHETDRNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVELLIVWENLDINRYMLKNSTTGEIIIKHLNKEQEADQSNFRD
SVSSAELEVQEKLSLLEWFANEYRKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDEEVYDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgctcacgagactgatagaaacattgagatatggaagatcaagaaattgata
aaagcactggaagctgctagaggcaatggaaccagcatgatttctcttatcatgcctcca
cgtgatcaagtatctcgcgttaccaagatgctgggtgatgaatatggaactgcttcaaac
attaaaagcagggtgaatcgtcagtctgtgcttggtgcaattacttctgctcagcaaagg
cttaagctttacaacaaggttcctcccaatgggcttgtgctttatacaggaacaattgta
actgaagatggaaaggagaagaaggtcacaattgattttgagccatttaggcccattaat
gcttctctttatctctgtgacaacaaatttcacacagaagcgctgaatgaacttctagaa
tctgatgacaagtttggttttattgtcatggatggtaatgggaccctttttggtacttta
agtggtaataccagagaagtacttcataaatttagcgttgacctcccaaagaagcatgga
agaggagggcaatcagctctgcgatttgctcgtcttcgaatggagaagcgccacaactac
gttaggaagacagcagagcttgctactcagttttttatcaatcctgccaccagccagccc
aatgttgcaggattgatactggctgggtcagctgacttcaaaactgagctcagtcagtca
gacatgtttgatccccgccttcaagccaaaatattaaacgtggtagatgtttcttacgga
ggggagaatggtttcaatcaagctattgagctgtcatccgagatcctgtctaatgtgaag
tttattcaggagaagcgtttaataggaaaatacttcgaggagattagccaggacactggg
aagtacgtttttggtgtagatgacacactgaaagctttggagatgggtgccgttgagttg
cttattgtatgggaaaatctggatataaataggtacatgctgaagaatagcacaactggg
gagattatcataaaacacttgaacaaggaacaggaggcagatcagagcaactttcgagat
tctgtcagctctgctgaattggaggttcaggagaagttatctttgctcgagtggtttgct
aacgaatacaggaagtttggttgcacacttgagtttgtgacgaacaaatctcaagaggga
tctcagttctgcagaggttttggtggtattggtggaatcctgcgttaccagcttgacata
agatcatttgatgagctctctgatgaagaagtttatgatgactctgaatag
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