KEGG   Carya illinoinensis (pecan): 122307346
Entry
122307346         CDS       T08745                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122307346
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122307346
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122307346
 Complex B
    122307346
 Complex C
   U2 SnRNP specific factors
    122307346
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 122307346
NCBI-ProteinID: XP_042976125
LinkDB
Position
1:5202369..5206961
AA seq 377 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPESGNSRGFGFISYDSFEASDAAIEAMTGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPTTQKSRPHTLFASGPPTLQNVPQANGTV
PPRPFANGSVAPSPIPALRPPQGAAFHPMPMGGQPAWQGQPQQLGQPMPPPVMPPQLQHF
RPPPPNMPPPPPPQAAPGPPRPMPPPMGMGVQPPMWRPPPPPPLQQQPSRLPMPQGSMPP
PPPMHNPNNPPLPPSSS
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgacgactcgaatagcacctggagtaggagccaatcttctcggccaacactctgccgag
aggaatcaggacgccaccgcttacgtcggcaatctcgaccctcaggtgagcgaggagtta
ctttgggagttgtttgttcaagcaggtcctgttgtgaacgtgtatgtccccaaggataga
gtgacaaatctgcatcaaggatatggatttgtggagttccggagtgaagaagatgccgat
tatgcaatcaaagtgctgaacatgattaaactttatggaaagcctatacgtgtaaataag
gcatcccaagataaaaaaagcttggatgtgggagcaaaccttttcattgggaaccttgac
cctgacgtcgatgagaagcttctatatgatactttcagtgcatttggagtcattgtcaca
aatcctaagataatgagagacccagaatcaggaaattcacgtggttttgggtttattagc
tatgattctttcgaggcatctgatgctgctattgaggcaatgactggccagtatctttgc
aaccgtcaaattacagtgtcatatgcatataagaaggatactaaaggggagcgtcatggt
actccagcagagagagtcttggctgcaagcaatccaactacccaaaagagcaggcctcac
actttatttgccagtggacctccaacacttcagaatgttccccaggccaatggaactgtg
cctccacgcccttttgcaaatggttctgtagctccaagcccaatacctgcactccgtcca
cctcaaggagcagccttccatcccatgccaatgggtggacagccagcttggcagggtcaa
ccgcagcaattgggtcaaccaatgccaccacctgtcatgcctccacaacttcagcatttc
aggccccctcccccaaatatgccaccgccccctccaccacaggcagctccaggtcctcca
aggcctatgccaccaccaatggggatgggagtccaaccacctatgtggcgtccaccaccg
cccccaccccttcagcaacagcctagtcggctccccatgccacagggatcaatgcctcca
cctccccctatgcataatcccaataacccccctttgccgccatcttcaagttga

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