Carya illinoinensis (pecan): 122307354
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Entry
122307354 CDS
T08745
Name
(RefSeq) chaperone protein ClpB3, chloroplastic-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cill03110
]
122307354
Chaperones and folding catalysts [BR:
cill03110
]
Heat shock proteins
HSP100
122307354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
AAA_18
IstB_IS21
Zeta_toxin
AAA_7
TniB
RNA_helicase
Mg_chelatase
AAA_28
AAA_24
AAA_25
NACHT
ResIII
ABC_tran
Torsin
NBD_SMAX1
KIF9
Motif
Other DBs
NCBI-GeneID:
122307354
NCBI-ProteinID:
XP_042976136
LinkDB
All DBs
Position
4:5644274..5650693
Genome browser
AA seq
975 aa
AA seq
DB search
MASAAFSGVSLALSQSVRTKCCNTNALFAQPPRLSPAKPKSVRALKSLQLYRNGAFPNGF
QRFCRTSRPLVVRCEASNGKIAQQDFTDMAWQAIVSSPEVAKENKHQIVETEHLMKSLLE
QKNGLARRIFSKAGVDNTRLLEATDKFIQRQPKVLGEPAGSMLGRDLEALVQRAREYKKE
YGDSFVSVEHLVLGFLQDQRFGKQLYRDFQITLQTLKSAIEAIRGRQSVIDQDPEGKYEA
LEKYGKDLTAMAKEGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISEGLA
QRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLKEVTDSDGQIILFIDEI
HTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVYVDQ
PSVEDTISILRGLRERYELHHGVRISDSALVAAAILSDRYISGRFLPDKAIDLVDEAAAK
LKMEITSKPTALDEINRSVLKLEMERLSLMNDTDKASKDRLNRLEAELSLLKEKQAQLTE
QWEHEKSVMTRIQSVKEEIDRVNLEIQQAEREYDLNRAAELKYGSLNSLQRQLESAEKEL
VEYINTGKSMLREEVTENDIAEIVSKWTGIPVSKLQQSDREKLLHLEEELHKRVVGQDPA
VKAVAEAIQRSRAGLSDPHRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRIDMSE
YMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHSDVFNVFLQILDD
GRVTDSQGRTVSFTNAIIIMTSNVGSQYILNMDDDTLPKELAYETIKQRVLDAARSIFRP
EFMNRVDEYIVFQPLDRDQINRIVRLQLERVQVRLADRKITIQVTDAAVQLLGSLGYDPN
YGARPVKRVIQQNVENELAKGILRGEFKDEDTVSIDTEVTAFSNGQLPQQKLVFKKLETG
SESPDADKEASLQEA
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgcagccttctccggggtcagcctcgctctttcgcagtcggttcggaccaaa
tgctgcaatacaaatgccctcttcgctcagcctccgcggctttctcccgcgaaacccaaa
tctgtcagggccttgaagtcgctgcaactgtacagaaacggtgcctttccaaacgggttt
cagagattttgtcggacttctcggccgcttgttgttcgctgtgaagcttcaaatggaaag
atagcccaacaagattttacggacatggcatggcaagcaattgtctcatcaccagaagtg
gcaaaagagaacaagcatcagatagtggagacagagcatttgatgaagtccttgttggag
cagaagaatgggcttgctcgccggattttctctaaggctggagttgacaatacccgcctt
ctcgaggccactgataagttcatccaacgtcaaccaaaggttcttggagaaccagctggt
tcaatgttaggacgtgatttggaagccttggttcaacgagccagggaatacaagaaagag
tatggggattcatttgtgtccgtggagcatctggttcttggttttctacaagatcaacga
tttgggaagcagttatatagagattttcaaataacactgcaaactttgaagtctgcaata
gaagctataagggggcgccaatcagttatcgaccaagatccagaggggaagtatgaagcg
ctggaaaaatatgggaaagatttgacagccatggcaaaagaaggaaagcttgacccagta
ataggaagagacgatgaaatacgcaggtgcatccagattctttccaggagaacaaagaac
aatcccgttctaattggtgagcctggtgtagggaaaactgcaatttctgaagggcttgct
caaagaattgtgcaaggagacgtacctcaagctctgatgaatcgtaagctaatatccctt
gacatgggtgcactaattgctggggcaaagtatcggggagaatttgaggataggctgaag
gctgtgctcaaggaagttacagactcagatggccaaattatcctcttcattgatgagatc
catacagttgttggggcgggtgctacgaatggtgcaatggatgcaggcaatcttttgaag
cctatgcttggccggggagagttgcggtgtatcggtgccacaactttggatgagtatcgc
aagtatattgagaaagatccagcattggagcgtcgttttcagcaagtttatgttgatcaa
ccttcggttgaagataccatttctatactgcgaggactgcgtgaaaggtatgagttgcat
catggagtccgcatttctgacagtgcacttgtggcagctgcaattctttcagaccgttac
atcagcggccgatttttacctgacaaagctattgacctagttgatgaagcagctgccaaa
ctgaaaatggaaatcacatcaaaaccaactgctcttgatgagatcaaccgttcagtgttg
aagctggaaatggagaggctctctcttatgaatgatactgataaagcttctaaagatagg
ctgaaccggcttgaggctgagttgtctctcctcaaggagaaacaagcccagctcactgaa
cagtgggagcatgagaagtctgtcatgactcgcattcagtcagtcaaagaagagattgac
agagtaaatcttgagatccagcaggctgaacgggagtatgatcttaatcgtgctgctgaa
ctgaagtatggcagcctcaattctttgcaacgacaacttgaaagtgcagaaaaagaattg
gttgaatacataaatacagggaagtccatgcttagggaggaggttacagaaaatgacatt
gctgaaattgttagtaaatggacgggtatccctgtttccaagcttcagcaatcagacagg
gagaagctcttacatttggaggaagagctccataaacgtgttgtgggtcaagatcctgca
gtgaaagctgtagcggaggctattcagcgatctcgagctggtctctcagatccccaccgt
ccaattgctagttttatgttcatgggtcccactggcgttgggaagacggaactagccaag
gcacttgcctcttatttattcaacacagaagaagctcttgttcgaatcgatatgagtgaa
tatatggaaaagcatgctgtttccagattgattggggccccacctggttatgtgggatat
gaggaaggtggacagctgacagagacagttcgcaggaggccgtatgcagtcattttgttt
gatgagatagaaaaggcacattctgacgtgtttaatgtattccttcagattttagatgat
gggagagtaactgattcccagggtcgcactgtgagttttaccaacgcaatcataattatg
acatcaaatgtgggttcccagtacatactcaacatggacgatgacaccttgccaaaggaa
ttagcatatgaaactattaagcagcgggtacttgatgctgcaagatcaatctttcggccc
gagttcatgaacagggttgatgaatatatagtattccagcctctcgatcgggatcagata
aacagaattgtcaggttacagttggagcgagtgcaagtgaggcttgcagacaggaagata
acaatccaggtgactgatgcagctgttcagcttcttggaagtcttgggtatgacccaaac
tatggtgccaggccagtcaaacgagtgattcagcagaatgttgaaaatgaactcgcaaag
ggaatcttgaggggagagtttaaagatgaagacacggtgtcaatagatacagaagttact
gcattttccaatggccagcttccccaacaaaaactagtcttcaagaagcttgaaactggt
tcagaaagtccagatgcagacaaagaagctagtcttcaggaagcctga
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