Carya illinoinensis (pecan): 122307357
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Entry
122307357 CDS
T08745
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122307357
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122307357
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122307357
03036 Chromosome and associated proteins [BR:
cill03036
]
122307357
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122307357
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122307357
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122307357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
122307357
NCBI-ProteinID:
XP_042976141
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All DBs
Position
4:complement(2710338..2716344)
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AA seq
524 aa
AA seq
DB search
MIKQLLNKLPRKSSKSAEHREGGGISTSSSNASTSSRHSDSASNLYANPSITSFSGFDSS
NIGLNHGGKLMQAVNLKPNGNLAGSPYEALPGFKDVPNTEKQNLFIRKLNLCCVLFDFSD
PTKDLKEKDIKRQILVELVDYVASANGKFSETVMQEMVKMVSLNLFRTLTSPPRENKVLE
AFDLEEEEPSMDPAWPHLQGVYEFLLRFVSSPETDAKLAKRYIDHSFVLRLLDLFDSEDP
RERDYLKTVLHRIYGKFMVHRPFIRKSINHIFFRFIFETEKHNGIAELLEILGSIINGFA
LPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPIT
NSSKEVMFLGELEEVLEATQPAEFQRCMVPLFRQVGRCLSSSHFQVAERALFLWNNDHIE
NLIRQNCSIILPIIFPALEKNSRNHWNLAVQNLTLNVRKIFSDTDPELFEECLLKFQEDE
AQDKEVKSKREATWKRLEEMASMKASIKEAVLVSSKKVTRAPSG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacagttacttaataagcttccacgcaagtcctctaagtcagccgaacatcgt
gaaggagggggaatctctacctcatcttcaaatgcttctaccagttccagacacagtgat
tcagcaagtaatctttatgcgaacccaagcattacgtctttctcaggatttgattcgtca
aatataggattaaatcatggcggtaagcttatgcaagctgtgaatttaaagccgaacggg
aatttggcaggttccccgtacgaggctttgcctggttttaaagatgttccgaatactgag
aagcagaacttgtttattagaaagctcaacttatgctgtgttctgtttgacttttctgat
ccaacgaaggaccttaaagaaaaggacatcaagcgacagatattggttgaacttgtggat
tatgttgcttcggcgaatgggaagttctctgaaacagttatgcaagagatggtaaagatg
gtatccctaaatttgtttagaactctcacttctccaccccgtgagaataaagtcttggaa
gcatttgatttggaagaggaggaaccatcaatggaccctgcatggccccacttgcagggt
gtttatgaattccttttgaggtttgtgtcttcacctgagacggatgcgaagttggccaag
cggtatattgatcactcatttgttctcaggctgttagatctttttgattcggaggacccc
agagagagagattacttgaaaacagttctgcaccgtatttatgggaaatttatggttcac
cgaccattcatcaggaaatcaataaaccacatcttctttcgttttatttttgagactgag
aagcataatgggattgcagagctgctggagattctgggtagtataatcaatgggtttgct
ctgccactgaaagaagagcacaagctctttcttgttcgagcacttattcctcttcataaa
ccaaaatgcataccaatgtaccatcagcagttatcttactgcataacccaatttgtggag
aaagactgcaagcttgctgatactattatacggggtctactaaagtattggccaattaca
aatagttctaaggaggtcatgttcttaggtgagctggaggaagttttagaagcaactcag
cctgctgagttccagcgctgtatggtacccttgttccgccaagttggtcgttgcttgagc
agttcacattttcaggtggcagagagggctttgttcttatggaacaatgatcacattgag
aacctgatcagacagaactgcagtattatactgccaattatcttccctgcattggagaaa
aattcaagaaaccactggaacctggccgtacagaacttgacactaaatgttcgtaaaatt
ttctcagatactgaccctgagctttttgaggagtgcttgcttaagtttcaggaagatgag
gcacaagataaggaagttaagtcgaaacgtgaagccacatggaaacgcttagaagagatg
gcttcaatgaaggcttccatcaaagaagcagtgctcgtctcttccaaaaaagtcactcgt
gcaccttctggctag
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