Carya illinoinensis (pecan): 122307398
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Entry
122307398 CDS
T08745
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A-like isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122307398
Membrane trafficking [BR:
cill04131
]
Protein recycling
Others
EARP complex
122307398
Endosome - Golgi transport
Tethering complex
GARP complex
122307398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
PWI
Motif
Other DBs
NCBI-GeneID:
122307398
NCBI-ProteinID:
XP_042976210
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Position
4:complement(767549..787605)
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AA seq
801 aa
AA seq
DB search
MADVTMNNVEQSYGETNDAQKNVFDLGAFVGDLTIEEDVSSDEISLEGLQQELEECKNDD
VVANILSKGAKLREYTKGVENNLRKVELDSIQDYIRESDNLVSLHDQIRECDSILSQMET
LLGGFQAEIGSISSDIKTLQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMVDIIVDG
EVNDEYMRTLEILSKKLKFVEVDPMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYA
LRKPKTNIQILQQSVLLKYKYVVSFLKEHGNEVYTEVRGAYIDTMNKVLSAHFRAYILAL
EKLQLDIATSSDLIGVEARSTGLFLRGREPLKNRSAVFALGERIKILKMHYILYMSCGKV
SCALGLAGELWAGILSRAGLKWVMARSVVEVLACWNRSHNSAQLAAVWRMIPLCLMWCLW
LERNERCFNDKERGVGEIWNFFEIDEPALIPHIAEASSSKYPYEVLFRSLHKLLMDTATS
EYHFCDDFFVEESMFYEIFAGPFAVIDEHFNSILQNCYDAIGLMLMIRIIHQHQLIMSRR
RIPCLDLYLDKVNISLWPRFKMVFDMHLNSLRNANVRTLWEDDVHPHYVMRRYAEFTASL
IRLNVEYGDGQLELNLERLRMAVDDLLIKLAKIFPKTKLQIVFLINNYDMTISVLKEASP
DVGKIQMHFEELLKSNTALFVEELLLEHFSDLIKFVKTRASEDPSSGSEKAIAVGEVEPL
VKDFGSRWKAAIELMHKDVITSFSNLLCGMEILRAALTQLLLYYTRLTDCIKRIVGGSSL
NKDLVSISSIMYEIRKYSRTF
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgtcacgatgaacaatgtggagcagtcttatggtgaaacgaatgatgctcag
aaaaatgtttttgatttaggagcttttgttggggacctgactatcgaggaggatgtgagc
agtgatgaaatatcattggaaggcctgcaacaagagctagaagaatgtaaaaatgatgat
gtagttgcaaacatactatcgaaaggtgcgaaattaagggagtatacaaagggagtcgag
aacaatttacggaaagtcgaattggattctattcaggattatatacgagaaagtgacaat
ttagtgtctctccacgatcaaattcgtgaatgtgacagcatcttgtcacagatggaaact
ctccttggtggatttcaagctgaaatcggttccataagttcagacataaaaacccttcag
gagaagtctatggatatgggtctgaagcttaagaatcgtaaggtagctgaatcaaaattg
gcaaaatttgttgaagacattatagttcctccacggatggttgacataattgttgatgga
gaggtcaatgatgaatacatgagaactcttgagattctaagcaagaagctgaagtttgta
gaagtggatcctatggtcaaggcttcaaaagctctaaaagatgttcagcctgagctagaa
aaactacggcagaaagcagtttcaaaggtctttgacttcattgttcagaagctttatgca
ttgagaaagcccaaaacaaatatccagatccttcaacagagtgttcttctaaagtacaag
tatgttgtttcctttctcaaagaacatggcaatgaagtgtataccgaggtccgaggagca
tacattgacacaatgaacaaggtcttaagtgcacacttccgtgcttatattctggctctg
gagaaactacagttggatatagcaacatcaagtgatttgattggtgtggaggcaagaagc
actggtctttttttaagaggaagggaacccctaaagaaccggtctgcggtttttgctttg
ggggagaggataaaaattttgaagatgcattatattctttacatgagttgtggaaaagtc
agttgcgctctagggctggcgggggaattatgggctggaatccttagtagagccgggcta
aaatgggttatggctaggagtgtggtggaggtacttgcatgctggaatagatctcacaat
agcgctcaactggcagcagtgtggcggatgatacctttgtgcttaatgtggtgtctatgg
ttggaaaggaatgagaggtgctttaatgataaggagcgtggagtgggggaaatctggaac
ttttttgaaattgatgaacctgctttaattcctcatatagccgaagccagctccagcaag
tatccttatgaagtgctcttcaggagtttgcacaagctgcttatggatactgctacttct
gagtatcatttctgtgatgatttctttgttgaggaatccatgttttatgagatttttgca
ggtccattcgctgtcattgatgagcatttcaattcaatacttcaaaattgttatgatgct
attggcttaatgctcatgattcggataatacatcaacaccagctcattatgtcacggcga
cggattccatgcttggatttatatctagacaaggtcaatatttctctatggccccgtttc
aagatggtatttgacatgcatctcaatagcctgcgcaatgcaaatgttaggacgttatgg
gaagatgatgttcaccctcactatgtcatgaggcgttatgctgaattcacagcttcacta
atccgcctcaatgttgaatatggagacgggcagcttgaattgaatttggaaagactgaga
atggcagttgatgacttgcttatcaagcttgcaaaaattttcccgaaaacaaaactacaa
attgtgtttctgatcaacaactacgatatgacaatttctgttttgaaggaagctagtcca
gatgttgggaaaattcaaatgcactttgaggaactgctgaagagcaacactgcgttattt
gtggaagagctgctactagagcatttcagtgatttaataaagtttgtaaagacccgagcc
tcggaggacccaagttctggttctgagaaagccatagctgtaggggaagttgagccactt
gtgaaggactttggaagcagatggaaagctgcaatagagctgatgcataaagatgtcata
acttctttcagcaacttactgtgtggcatggagattttgagggctgcgttgactcagctg
ctgctctattatacgaggctcacggattgcataaagaggattgttggtggatcctcgctg
aacaaggatctggtgtccatatcttcaatcatgtatgaaattaggaaatactccaggacc
ttctaa
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