Carya illinoinensis (pecan): 122307445
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Entry
122307445 CDS
T08745
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa-like
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122307445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122307445
Spliceosome [BR:
cill03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122307445
Complex B
122307445
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
122307445
NCBI-ProteinID:
XP_042976277
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All DBs
Position
1:5396623..5403501
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AA seq
488 aa
AA seq
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MGDYSDAFMRNQQNAAVQARPKVQNRANVQQLKLIGQSHPTGLTANLLKLFEPRPPLEFK
SPPEKRKCPPLSGMAQFVSRFAEPGDPEYSPPIQEAETPAQRRARVHKLRLEKGAEKAVE
ELQKYNPQEDSNISGDPYKTLFVARLSYETTESRIKREFESYGPIKRVRVIADKETNKPR
GYAFIEYVHTRDMKAAYKQADGRKIDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGE
DVNQRYSGREQLQSGAPSHSEEPRAREDRHADREREKSRERGREREREKSREQSHDRHRD
RDHREDRHHKDRERDRERERDRGRDRDRTRDRDRDRGRDRGRDYERDRHRDRDRARERES
ERDLEVEDHDRGRSRDRDIYDRVESKHERDRHGERVRDYDHTEPEDDHGWYEQPEQGRNK
QYDHMDIQDDDDHYDQYPDLGHDQYDRMGEGDYHYERATSESRDRGRTRDLERENRRSGR
SLSQEYEY
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgggagactacagcgatgccttcatgcgcaaccaacaaaacgccgccgttcaggcccgc
cccaaagtccagaaccgcgctaatgtccaacagctcaaactgattgggcagagtcatccc
actggtctaacagccaacttgttgaaactctttgagcctcgaccacctttggagtttaag
tcacctccagagaaaaggaaatgcccaccattatcagggatggcacaatttgtgagtagg
tttgcagagcctggagatcctgaatattctccaccaatccaagaggctgaaactcctgca
caaagaagggctagagttcacaagttgaggctagaaaagggtgcagaaaaggctgttgag
gagttacagaaatataacccacaagaagactcaaatatttctggagatccctacaagaca
ttgttcgtggctagacttagttatgagacaacagagagcagaatcaaaagggagtttgag
tcttatgggccaatcaagcgggttcgagtgattgctgacaaagagacaaataagcctaga
ggctatgctttcattgagtatgtgcatacacgggatatgaaagctgcatataaacaagct
gatgggaggaagattgatggcagaagggtgctggtggatgttgagcgtggtagaactgtc
ccaaattggcgtcctcggcgacttggtggtgggctaggaaccaccagagttggaggggaa
gatgttaaccagagatattcggggagggagcaattgcagtctggagcaccatctcactct
gaggagccaagagcacgagaggatcgacatgcagacagggaaagggagaaatcccgtgaa
aggggcagagagagggaacgggagaaatcccgtgaacaatcccacgacaggcatagggat
cgtgatcatagagaggataggcaccacaaagatcgcgaaagggacagggaaagagaaaga
gaccggggtcgtgatcgtgatcgaacacgtgatcgcgatagagaccgaggtcgggatcgt
ggtcgtgactatgaacgtgatcgtcatagagatcgtgatcgtgctcgagagagggagagt
gagagagacttagaggttgaagaccatgaccgtggccgctcccgtgatagggatatttat
gatcgagttgaatcaaaacatgagagggaccgccatggtgaaagggtgcgggactatgat
catactgaacctgaggatgatcatggatggtatgaacagcccgagcaagggcgtaataaa
cagtatgatcacatggatatccaggatgatgatgaccattatgatcaatatcctgatctt
ggtcatgatcagtatgatcggatgggggagggtgattaccattatgagcgtgcaacatct
gagtcccgtgatagggggagaactcgagatttggagcgtgaaaatcgacgctcaggaagg
tcactttctcaggagtacgaatactga
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