Carya illinoinensis (pecan): 122307466
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Entry
122307466 CDS
T08745
Name
(RefSeq) two pore calcium channel protein 1A-like isoform X1
KO
K16900
two pore calcium channel protein, plant
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122307466
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
122307466
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Motif
Pfam:
Ion_trans
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
122307466
NCBI-ProteinID:
XP_042976294
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Position
4:18972527..19039492
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AA seq
735 aa
AA seq
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MERPFLGGESSGTGARRRDRHNRSDAIAFGSPYEKAAALVDLAEDGIGLPEQILEQSNFQ
NAAKFYFMLIRLDFIWVLNYFALIILNFIEKPLWCTNYSTYSCNNRDYFYLGELPYLTGV
ESLVYEGITLIIVVAHAFFPISYEGHRLYWKDPLNRLKVACLLILVADILVYAIYLSPVA
FDYLPFRIAPYIRVVFFMLNFRELRATILILAGMLGTFLNVLALGLLFLLFSTWLAYVIF
EDTQQGTTEFTSYGTTLYQMFVLFTTSNNPDVWIPAYKDSRWYCLFFVLYVLLGVYFVTN
LILAVVYDSFKGQLAKQVSKMDGNRRRILEKAFNLVDKDNRGFIDKQQCILLFEELNKYR
TLPKISKEEFELIFDELDDSHDFKINLDEFADLCNAIPLKFQKEESPSCFEICPSFYHSS
FSEKFKGFVRRPIFGYVISFILVLNLFAVIVETTLDIENNSAQRVWQEVEFVFGWIYVLE
MALKVYSFGFKNYWMDGQNRFDFMVTWVIVIGETLTFVSPEGLTFLSNGEWIRYLLLARM
LRLIRLLMYVQRYRAFIATFLTLIPSLMPYLGTVFCVLCIYCCLGVQIFGGIVNAGNTSL
EATDLYDNDYLLFNFNDYPNGMVTLFNLLVMGNWQAWMQSYKDLTGTAWTLTYFVSFYLI
TVLLLLNLIVAFVLEAFFAEMDIELSGKREEEDKDADGEKDRRRTVGTKSRSQRIDALLH
HMLSAELEQSQSSNP
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccttttctgggcggagaaagcagtggaactggggctcgtcggagagaccgc
cataatcggtctgatgctatagcttttgggtcgccttatgaaaaggctgcggcgctggtt
gatctggctgaagatggtattggtttacctgagcaaattcttgaacaatcaaacttccag
aatgctgcaaaattctacttcatgcttattcgacttgatttcatttgggtcctcaattat
tttgcattgataatcctaaatttcatagaaaaacctttgtggtgtaccaactattctaca
tattcttgcaacaacagggactacttttatcttggggaactgccctatttaaccggggtg
gagtctcttgtatacgagggcataactctcatcatagttgtggcacatgctttctttcca
atctcgtatgaagggcatcgcctttattggaaagatcctcttaatcgcttgaaggtggct
tgcttgttaattttggttgctgacatattggtttatgccatctatttgtctccagtggcc
tttgactatcttccattcagaatcgcaccatatatcagggtcgtgtttttcatgcttaac
tttagggaactacgagcaaccatcctcatcctggccggaatgcttggcacgttcttgaat
gtcttggctttagggctgttgtttcttctgttttccacttggttagcctatgttattttt
gaagatacccaacagggaacaacagaatttacttcatacggtaccactctctaccagatg
tttgttctgttcaccacatccaacaatccagatgtctggattcctgcatacaaggattcg
cgttggtattgtttgttttttgtactctacgtgctattgggggtttacttcgtcaccaac
ttgattcttgccgttgtatatgacagcttcaaaggtcagcttgcaaaacaagtttctaag
atggatggtaatagaagacgtatcttggagaaagcttttaatctcgtagataaagataat
cgtggatttattgacaaacaacagtgcattctactgtttgaggaactgaacaaatacagg
actttgccaaaaatatcgaaggaagaatttgagttgatatttgatgagcttgatgatagt
cacgacttcaagatcaacttggatgagtttgctgacctttgcaatgccattcccctaaaa
ttccagaaggaggagtctccatcctgcttcgaaatatgtccatcattctaccattcatcc
ttttctgaaaagtttaaaggctttgtacgcagacccatatttggatatgtaatatccttc
attttggtactgaatctgtttgctgttattgttgaaacaacgcttgatatagaaaacaat
tctgctcaacgggtgtggcaagaggtagagtttgtctttgggtggatatatgtactggaa
atggctctaaaagtatattcatttggatttaagaattattggatggatggccaaaatcgc
tttgattttatggtgacatgggtaatagttatcggagaaaccttaacttttgtgtcccct
gaaggtctaacatttctttccaatggagaatggatccgctaccttcttcttgcaagaatg
ttaaggttgataaggttgctgatgtatgttcagcgttaccgtgccttcattgccactttc
ctaacccttataccaagtttgatgccataccttgggaccgtattttgtgtcctatgtata
tattgctgtcttggcgtacagatatttggtgggattgtcaatgctggaaatactagtttg
gaagcaacagatctttatgataatgactatttacttttcaatttcaacgactatccgaat
gggatggtgacacttttcaatctactagtcatgggaaattggcaagcatggatgcagagc
tacaaggatttaacgggaactgcatggacccttacttattttgtcagcttctacttaata
actgtgttactgctcttgaatttgattgtagcttttgtcttagaggcattctttgctgaa
atggatatcgagttatcaggaaaaagggaagaagaggacaaggatgcggatggagaaaag
gaccgtcgacgaactgttggcacaaaatcacgaagccagaggattgatgctcttctccat
catatgttgagtgcagagctcgagcagtcacaatcctccaatccatag
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