KEGG   Carya illinoinensis (pecan): 122307507
Entry
122307507         CDS       T08745                                 
Name
(RefSeq) nuclear cap-binding protein subunit 2-like isoform X1
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03013  Nucleocytoplasmic transport
cill03015  mRNA surveillance pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122307507
  09122 Translation
   03013 Nucleocytoplasmic transport
    122307507
   03015 mRNA surveillance pathway
    122307507
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122307507
   03041 Spliceosome [BR:cill03041]
    122307507
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     122307507
Spliceosome [BR:cill03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    122307507
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 122307507
NCBI-ProteinID: XP_042976351
LinkDB
Position
4:20094045..20103781
AA seq 251 aa
MASLFKDPSKLSAYRDRRFPGSQEEFEHALQTSTTVYVGNMSFYTTEEQVYEIFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDSEDSCKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQRELEAQRQLVDYGGDSLGSFPPVITPQYGRRG
GSHGRGGSYRRDYPRKRQRDDDLHGHETSKRTSDHESRRSSDYDIRPEKNPRFRESGDSD
DDEEDDQKRRS
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcttcccttttcaaggatccatcaaagctttcagcatatagggatagaagatttcct
ggatcacaagaggaatttgaacatgcacttcagacatcaacgactgtgtatgtgggtaat
atgtctttctatactacagaagagcaagtttatgagattttctcccgagctggggagatt
aagaagataattatgggtttggataagaacacgaaaaccccttgcggcttttgttttgtc
ctgtactattctcgagaagacagtgaggattcttgcaagtatataagtgggacaattctt
gatgatcgtcctattcgtgtggattttgattggggattccaagaaggaaggcaatggggc
cgtggtcgaagtggtggacaggtgcgcgatgaatatcgtactgattatgatcctgctaga
ggcggttatggaaagttagttcagagggagctggaagcacaaaggcagcttgtagattat
ggtggcgattcattgggctcttttccaccagttataacacctcagtatggtagacgcggt
ggaagccatggtcgtgggggttcttatcgtagagattacccacgaaagcgacaacgagat
gatgacctccatgggcatgagacctcaaagagaacttcagatcatgaatccaggagaagc
tctgactacgacatcagaccggagaagaatcctcggtttcgtgagagtggcgactctgat
gatgatgaggaagatgaccagaagagacgatcttag

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