Carya illinoinensis (pecan): 122307558
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Entry
122307558 CDS
T08745
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122307558
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122307558
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122307558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_25
AAA_28
RsgA_GTPase
Zeta_toxin
DO-GTPase2
TIP49
Motif
Other DBs
NCBI-GeneID:
122307558
NCBI-ProteinID:
XP_042976418
LinkDB
All DBs
Position
4:complement(21849277..21856824)
Genome browser
AA seq
1448 aa
AA seq
DB search
MESGDIYNASIWRNNTMEVFSRSSLEEEDEEALKWAALQKLPTFNRLKKGLLTTPQGEAS
EINIHDLGVQEKKSLMERLLKVPEEDNEKFLQKLKDRLDRVGITLPTIEVRFENLKVEAD
AHVGSRALPTFFNFSFNILEGFLNYLHILPSRKKHLSILQDVSGVIKPSRMTLLLGPPSS
GKTTLLLALAGELDPDLKFSGNVTYNGHEMREFVPQRTAAYVSQHDLHIAEMTVRETLAF
SARCQGVGSRYEMLVELARREKEANIKPDPDIDIYMKAVATEGQEASVVTDYILKVLGLE
VCADTLVGNQMLRGISGGQRKRVTTGEMLVGPSKVLFMDEISTGLDSSTTYQIVNSIKQY
AHILNGTVVISLLQPAPETYNLFDDIILLSDGQIVYQGPREQVLEFFEYMGFKCPERKGV
ADFLQEVTSKKDQEQYWAAKDEPYNFVTSKEFAEAFESFPVGRKLTEELATPFNRAKSHP
AALTNRKYGVRKAELLKACLSREFLLMKRNSFVYTFKLIQLLIMALIAMTIFLRTEMHRN
SVTDGGIYAGALFYGVVVIMFNGTAEISMTVAKLPVFFKQRNLLFYPAWAYSLPSWIIKI
PITFVEVAVWVFITYYVIGFDPSAGRFFRQCLLLVAVNQMASALFRFVAAIGRGDLIVAT
TFGSFALVMLFALGGFVLSRENMKKWWIWGYWTSPLMYGQNAIVVNEFLGKSWRHVLPNS
MESLGVEVLKSRGFFTHAYWYWIGVGGLIGYILVFNAGFTLALNYLNPLGKPQAVKQEEP
QSNRHDDRSGQAGQSSRRGNSSSHQFKIESRIETSMRSISSKSSSVSAEDTVEVSRNGKR
GMVLPFEQHAITFDEITYSVDMPQEMKIQGVTEDKLVLLKDVSGAFRPGVLTALMGVSGA
GKTTLMDVLAGRKTGGYIDGKITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYS
AWLRLSPDVDSEARKMFIEEVMELVELKPLRQALVGLPGVNGLSTEQRKRLTIAVELVAN
PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG
QEIYVGPLGRHSCHLINYFEGIEGICKIKDGHNPATWMLEVTSSAHEMALGIDFANVYRE
SELYRRNKALINELSSPAPGSKDLYFPTQHSQTYFTQFMACLWKQHWSYWRNPLYTAVRF
LFTTIIALMFGTMFWNLGSKTTKKQDVFNAMGSMYTSVLFIGVKNANSVQPVVAVERTVF
YREKAAGMYSALPYAFAQVLIELPYVFAQAAVYGVIVYAMIGFEWTAAKFFWYIFFMYVS
LLYFTFYGMMTVAATPNHHISSIVSSAFYALWNLFSGFIIPRPRIPIWWRWYSWACPLAW
TLYGLVAAQFGDKKDILDTGETVEDFVREYFGFKHEFVGVAAAVVVGFALLFAFIFAVSI
KVLNFQRR
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggagagtggtgatatttacaacgcgtcgatatggagaaacaataccatggaagttttc
tcaaggtcttcactggaagaagaagacgaagaagctcttaaatgggcagcgctacagaag
cttcctactttcaatcgtctgaagaaaggtttgctgactacgccgcaaggcgaggccagt
gaaatcaatatacatgatcttggagttcaggaaaagaagagtttaatggagaggttgttg
aaggtccccgaagaggataatgagaagttcttgcaaaagctcaaggatcgtctcgacaga
gtaggaatcactcttccgacaattgaagtccgattcgagaatttaaaagttgaggcagat
gctcatgttggaagcagagctctacctacattcttcaatttctcctttaacattcttgag
ggtttcttgaattatcttcatattcttccaagtagaaagaagcatttgtccatccttcaa
gatgttagtggggtcatcaagccaagcagaatgacgctacttttgggtcctccaagttct
ggaaagaccacgctcttgctggctttggctggagagctcgatcctgacctgaagttttct
gggaatgttacttataatggccacgaaatgcgggagtttgtaccccagagaactgctgcc
tatgtcagtcagcatgacctccatattgccgaaatgacagtaagggagaccttggccttt
tctgcaagatgtcaaggggtcggatcacgttatgagatgctggtagagctagcaagaaga
gagaaagaagcaaatattaagcctgatcctgatattgacatctacatgaaggcagtagca
acagaaggtcaggaggccagcgtggtgacagattatattttaaaggttctgggattggaa
gtctgtgcagatactttggttgggaatcaaatgttacggggtatatctggaggacaaaga
aagcgtgtaacaacaggggagatgttggttggaccatctaaggtgctattcatggatgaa
atatcaactggtctggatagctcgacaacttatcagattgtgaattcaatcaagcaatat
gctcacattctcaatggcactgtcgtgatctcactcctccagccggcaccagagacttac
aatctttttgatgacattattctcctctctgatggccagattgtatatcagggtccccgt
gagcaagttcttgaattttttgaatatatgggcttcaaatgtcctgaaaggaaaggggtg
gccgacttcctccaagaagtgacgtcaaagaaagatcaggagcagtattgggcagctaaa
gatgagccttacaattttgtaacaagcaaggaattcgctgaggcattcgaatcgtttcct
gtgggacggaaacttacagaagagcttgcaactccatttaacagggcaaagagccaccca
gctgctttgacaaatagaaagtatggtgttagaaaggcagagctgttaaaagcttgctta
tcaagagaattcttgcttatgaagaggaattcgtttgtctacaccttcaagctcatccaa
cttctaataatggccctgattgcaatgacaattttcctacggacggagatgcaccgcaat
tcagtgaccgacggagggatctacgctggcgctttgttctatggtgttgttgttatcatg
tttaatggtacagctgagatttccatgacagtagcaaagcttccggttttcttcaagcaa
aggaatctcctattctatcctgcatgggcatactctcttccttcatggatcatcaagatc
cctatcacgtttgtagaagttgctgtctgggtttttatcacttactatgtcattggattt
gatccaagtgctggaaggttttttagacagtgccttctgctcgtagctgttaatcagatg
gcttctgcattattccgcttcgttgctgcaattggtaggggggacctgattgttgccacc
acatttggttcatttgcactggtcatgctgtttgcattgggtggctttgtcctgtcaaga
gagaacatgaagaagtggtggatatggggttactggacgtcacctttgatgtatgggcag
aatgctatagtggttaatgagttccttgggaagagttggagacatgttctcccaaactca
atggaatcactgggagttgaagtgttgaagtcccgtggattcttcacacatgcctattgg
tattggataggagtagggggattgattggatatattttagttttcaatgctggcttcact
ctggcgctcaattacctcaatccattgggaaagccacaggctgttaaacaagaagaacct
caaagcaataggcacgatgacagatcaggacaagctggtcagtcatcacgtagaggaaat
agctcaagtcaccaattcaaaatagagagtagaattgaaactagcatgagaagtatttcc
tctaagtcctcatctgttagtgcggaggatacggtagaggtcagtcggaatgggaaaaga
ggcatggttcttccatttgaacaacatgccattacctttgatgaaattacatactcggtt
gacatgccacaggaaatgaagattcagggtgttactgaagataaattggtgctcctgaag
gatgtgagtggtgctttcaggccaggagttctcacagctctgatgggtgtcagtggtgct
ggtaaaactactctgatggatgtgctggctggtagaaaaaccggtggatatattgacggg
aagataacaatttctgggtacccaaagaagcaagagacgtttgctcgaatttctggatat
tgtgagcaaaatgacatccactctcctcatgttactgtctatgagtccttgctctattca
gcatggctccgcctttcgcctgatgttgattctgaagcaaggaagatgttcattgaggaa
gttatggagctcgtggaattgaaacctttgaggcaagcattggttgggttgcctggtgtg
aatggcctttcgactgagcaacgcaagaggcttaccattgcagtagagctagttgccaac
ccctccataattttcatggacgaaccaacttccgggctggatgctagagctgctgctatt
gtcatgaggactgtgaggaacactgtggacacaggaagaacagttgtgtgcaccatccat
cagccaagcattgacatatttgaagcatttgatgagctattcctaatgaagcgtgggggt
caggagatatatgttgggccattgggtcgccactcttgccatctaatcaattattttgag
ggaatagagggaatctgtaaaattaaagatggtcataatccagcgacttggatgttggaa
gttacttcctcagcacatgaaatggctttgggaattgattttgctaatgtgtacagagaa
tcagagctctacaggagaaacaaagcacttattaatgagttgagcagccctgctcctgga
tcaaaggacctctatttccctacacaacactcgcagacatatttcacacaattcatggct
tgcttgtggaaacaacactggtcatattggcgcaacccgctgtatactgctgtaaggttt
ctcttcacaaccatcatagccctgatgtttgggacaatgttctggaatctcggctcgaaa
acgacaaagaaacaagatgtatttaatgctatgggttcgatgtacacttctgttctcttt
atcggtgttaaaaatgccaattcagtgcagccagtggtggctgttgaacgaacagtcttc
tacagagaaaaagcagcagggatgtattcagccttgccttatgcctttgcacaggttctg
attgagctcccatatgtttttgcacaagctgcggtatatggtgtcatagtttatgcaatg
attggttttgaatggactgcagccaaattcttctggtatatatttttcatgtatgtctcc
cttttgtacttcactttctatggcatgatgactgttgctgcgacaccaaaccaccacatt
tcttccatagtttcctccgcattttatgcactatggaatctcttctcaggatttataatc
ccacgacctaggatcccaatttggtggagatggtactcatgggcatgtccattagcttgg
accctttacgggttggttgcagcacagtttggggataagaaggacatccttgatactggg
gaaacagtggaagattttgtgagagagtattttggtttcaaacatgagtttgtgggagtg
gctgcagctgtcgttgttgggtttgcattactctttgcatttatctttgctgtgtccatt
aaagtgttgaacttccagaggcgatag
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integrated database retrieval system
