Carya illinoinensis (pecan): 122307605
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Entry
122307605 CDS
T08745
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
cill04517
IgSF CAM signaling
cill05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122307605
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122307605
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122307605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122307605
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cill04812
]
122307605
Membrane trafficking [BR:
cill04131
]
Others
Actin-binding proteins
Arp2/3 complex
122307605
Cytoskeleton proteins [BR:
cill04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
122307605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Beta-prop_Aladin
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
RMC1_N
Beta-prop_NUP159_NUP214
WDR90_beta-prop_4th
eIF2A
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Ge1_WD40
BNR_3
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
122307605
NCBI-ProteinID:
XP_042976510
LinkDB
All DBs
Position
4:23358105..23375783
Genome browser
AA seq
378 aa
AA seq
DB search
MAAISVHQFAQCITCHAWSPDHSMVAFCPNSNEVHIYRLSQDKWEKVHVLQKHDQIVSGI
DWSARSNRIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVQWSPKENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTGVAWHPNNILLATTSTDGKCRVFSTFIKGVDT
KDSRTGTSSDSKFGEQILQLDLSFSWAFGVKWSPSGNTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFVSERMVVGVGFDCSPMVFAADERGIWSFVRFLGERKMASSGSKYG
SQFSEAFGKLYGQSKHGVSNDAVEPSRSRGGVHENCINCIVPLRQPGISTVMRFSTSGLD
GKVVVWDLENQADLSDYL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatctcagtgcatcagttcgctcagtgcatcacctgccatgcttggagcccc
gaccactccatggttgcattttgtcccaacagtaatgaagttcatatctatagactgtcc
caagacaagtgggaaaaggttcatgttcttcaaaagcatgaccaaattgtttctgggata
gactggagtgcaaggtccaacaggatagttactgcatctcatgatcggaattcatatgtg
tggaatctagaaggatcagaatgggtaccaacccttgttatccttcggctaaatcgtgct
gcactgtgtgtccagtggagtccaaaagaaaacaagtttgctgttggaagtggggctaaa
actgtttgtatatgctactatgagcaggagaataactggtgggtcagtaaactaatcagg
aaaagacatgattcttctgtgactggtgttgcttggcatccaaataatattcttcttgca
acgacatccacagatggaaaatgcagagtgttttccacgtttattaaaggcgttgacaca
aaggattcaagaacaggaacttcttcggattcaaaatttggggagcaaattcttcagctt
gatctctcattttcatgggcatttggggtgaagtggtctccaagtggcaataccttagct
tatgtaggtcataattctatgatttattttgtcgatgatgttggaccttcccctttggct
caaaatgttgcattccgtgatttgcctcttcgtgatgttttatttgtttctgagagaatg
gtcgtaggagtggggttcgactgcagcccaatggtttttgcagcagatgaaagaggaata
tggagctttgtcaggtttcttggtgaaaggaaaatggcatcttcaggatcaaaatatggt
tcacagttttctgaagcatttgggaaactatatgggcaatcaaagcatggagtgagcaat
gatgccgttgaaccttcaagatcaagaggaggagttcatgagaactgcataaattgcatt
gtgccgcttagacagcctgggatctctacggtaatgcgcttcagcacctcaggactggat
ggaaaagttgttgtatgggatttggagaaccaagcagatctatctgactacttgtaa
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