Carya illinoinensis (pecan): 122307711
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Entry
122307711 CDS
T08745
Name
(RefSeq) RHOMBOID-like protein 1
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122307711
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
122307711
Peptidases and inhibitors [BR:
cill01002
]
Serine peptidases
Family S54: Rhomboid family
122307711
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EMC6_arch
Motif
Other DBs
NCBI-GeneID:
122307711
NCBI-ProteinID:
XP_042976696
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Position
4:complement(28436747..28451039)
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AA seq
393 aa
AA seq
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MAMMRTEPSSSSAPQFEIKAQSRGRDNAVHPASSTTSMSRLATTTGSFGGGEFRPFKRWA
PWLVPAFVVANIALFVATMYVNNCPKNSTSCVATRFLGRFSFQTIKENPLLGPSSSTLEK
MGALEVEKVVHGHQAWRLITCIWLHAGVLHVLANMLSLVFIGIRLEQEFGFVRIGLLYVI
SGFGGSLLSALFIQSQISVGASGALFGLLGGMLSELITNWTIYANKLAALLTLLFIILIN
LAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRNVPPGYIATPVKSKHKMYQY
VLWVLSLTLFIAGSTAGLIMLFRGVNLNHYCSWCHYLSCVPTTKWSCDAGPVYCQSTQIG
NQLNLTCLSSGKNNTYIIDNTSQVRQLCAQLCS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggccatgatgcggacggagccttcgtcttcttcggctccacagttcgagattaaggcc
caatcgcggggcagggacaacgcggtccacccggcctcatcgacgacgtcgatgtcgagg
ctggccaccacgacaggctcgtttggcggcggggagttcaggccgttcaagcggtgggca
ccgtggctggtaccggccttcgtggtggccaacattgccctcttcgtggccaccatgtac
gtcaacaattgcccaaagaactctacctcctgcgtcgccaccaggttcttgggcagattc
tccttccagaccatcaaggagaatccccttctggggccttcttcctccacgttggagaag
atgggtgctctagaagttgaaaaagtagtccatggacaccaggcatggcgtctgatcact
tgtatatggctacatgctggagttctccatgtacttgccaatatgttgagtcttgtattc
attggaattcggcttgaacaagaatttggatttgttcgaatcgggctgctttatgtcata
tctggttttggagggagtttgttgtcagctctttttatccaatcgcaaatatctgttggt
gcctctggtgcactttttggtttactaggaggcatgctttcagagctcattacaaattgg
acaatatatgcaaataagttagcagcattgttgactcttctattcatcatcctaataaat
ttagctgttggaatcctaccacacgtggacaattttgctcatattggaggatttctttct
ggctttcttcttggatttgtgtttctgattcgtcctcagtttggatgggtcagccagaga
aatgtaccacctggatatattgcaactcctgttaaatctaaacacaagatgtatcagtat
gtactgtgggttctctctttgacactattcattgctggatctactgctgggttgattatg
ctcttccgaggtgttaatctgaatcattactgctcctggtgtcattatttgagctgtgtc
cctaccacaaaatggagctgcgacgcagggccagtctattgtcagtcgacccaaattggg
aaccagcttaacttgacatgcctaagcagtggaaaaaacaacacgtatattatagataac
acttcccaggttcggcagctatgtgctcagctttgcagttga
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