Carya illinoinensis (pecan): 122307724
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Entry
122307724 CDS
T08745
Name
(RefSeq) transcription factor PRE6-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122307724
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122307724
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
TSC22
bHLH_IRO3
CENP-F_leu_zip
SYCE1
CSN5_C
PUMA_CC
DUF948
FAM120A
Motif
Other DBs
NCBI-GeneID:
122307724
NCBI-ProteinID:
XP_042976721
LinkDB
All DBs
Position
4
Genome browser
AA seq
92 aa
AA seq
DB search
MSSRRPRQSGTSSRITDDQIIDLVSKLRQLVPEIRNRRSDKVPASKVLQETCNYIRNLHR
EVDDLSERLSQLLATIDAESAEASIIRSLITQ
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaggaggccgaggcagtcggggacttcttcgaggatcacagatgaccaaatc
atcgacctcgtttccaagttacgccaacttgttcctgagattcgcaataggcgttctgac
aaggtacctgcttctaaggtcctacaagagacctgcaactacatcagaaacttgcacaga
gaggtggatgacctgagcgagcgactgtcccagcttttggctactattgatgctgagagc
gccgaagcctcgattattcggagcttgattacgcaataa
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