Carya illinoinensis (pecan): 122307842
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Entry
122307842 CDS
T08745
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122307842
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122307842
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pput2613-deam
Motif
Other DBs
NCBI-GeneID:
122307842
NCBI-ProteinID:
XP_042976879
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Position
4:complement(44201906..44203825)
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AA seq
393 aa
AA seq
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MGLKMNLPTIALFLLLAAASAAGANINIRKYGAQVNSDITPALTKAWKDACQTPGTNTVV
IPKGTYRLGAVQFMGPCKGHIELQVRGILLAPGDRGYFKSGSWVNFQRIDGFTLSGGGTF
DAKGKHVWGKRSCSGIRYCGDLPISLRFDFITNGLIKDITSLDSKQFHINLLGCKNVTFQ
HVNVIAPDHSPNTDGIHIGRSTGIKIIDTKIATGDDCISLGDGSENILIKGVTCGPGHGI
SVGSLGKYKNEAPVVGVNVVNCTFINTQNGVRIKTWPNSFAGTASDMRFENLLMKNVSTS
MLIDQLYCPWNQCKAQIPSKVKISNISFKNIRGTASTKDVVKLLCSKSFPCQDVKVTDID
IRYSGRDGPATFQCVNIKPTTSGRLYPPPCSSH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaaaatgaatctccccacgattgctttgttcttgttgttggctgcagcatcc
gctgccggtgctaacattaatatcagaaagtacggagcccaggttaattcagatatcacc
ccggctttgacaaaagcttggaaagatgcgtgtcaaacaccgggtacgaacacagtggtg
atcccaaaagggacgtacaggttgggagcagtgcagtttatgggtccatgcaagggtcat
atcgagcttcaggttcgaggcattttattagccccaggcgaccgaggttacttcaagtct
ggtagttgggtcaattttcagaggatcgatggcttcactttgtctggcggtggaactttt
gatgccaaaggcaaacacgtttggggaaaaagatcttgttccggtattagatactgcggt
gaccttcccattagcttaaggttcgatttcatcaccaatggattgatcaaggacataaca
tcattggatagcaaacagttccacattaatttgttgggctgcaaaaacgttaccttccaa
cacgtaaatgtcatagcacctgatcatagtcccaacacggatggaatccatattgggcgg
tcaactggaatcaagattattgatacaaagattgcaaccggtgatgattgtatctctctt
ggtgatggcagtgagaatatacttatcaagggagtaacttgcgggcctggccatggaatc
agcgtaggaagtcttggtaagtacaaaaatgaagcgcctgtagttggagtcaacgttgtt
aactgcacattcataaatacacaaaatggcgtgagaatcaagacctggcctaactccttt
gccgggactgcttctgacatgcgtttcgagaatctcctcatgaagaatgtaagcacctct
atgctcatagatcaactatactgcccatggaatcaatgcaaagcgcagattccttcaaag
gttaagatcagcaacattagcttcaagaacatacgaggaacagctagtacaaaggatgtg
gtcaaactactttgtagcaagtcgtttccatgtcaagatgtgaaggtcactgacatagac
atcagatacagtggaagagacgggccggctactttccaatgcgttaatatcaaacccacc
accagtggcagactgtatcctccaccttgcagttctcactga
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