Carya illinoinensis (pecan): 122307877
Help
Entry
122307877 CDS
T08745
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Module
cill_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122307877
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
122307877
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Pput2613-deam
Motif
Other DBs
NCBI-GeneID:
122307877
NCBI-ProteinID:
XP_042976925
LinkDB
All DBs
Position
4:complement(44224963..44226843)
Genome browser
AA seq
393 aa
AA seq
DB search
MGLKMNLPTIALFLLLAAASAAGANINIRKYGAQVNSDITPALTKAWKDACQTPGTNTVV
IPKGTYRLGAVQFMGPCKGHIELQVRGILLAPGDRGYFKSGSWVNFQRIDGFTLSGGGTF
DAKGKHVWGKRSCSGIRYCGDLPISLRFDFITNGLIKDITSLDSKQFHINLLGCKNVTFQ
NVNVIAPDHSPNTDGIHIGRSTGIKIIDTKIATGDDCISLGDGSENILIKGVTCGPGHGI
SVGSLGKYKNEAPVVGVNVVNCTFINTQNGVRIKTWPNSFAGTASDMRFENLLMKNVSTS
MLIDQLYCPWNQCKAQIPSKVKISNISFKNIRGTASTKDVVKLLCSKSFPCQDVKVTDID
VRYSGRDGPATFQCVNIKPTTSGRLYPPPCSSH
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgaaaatgaatctccccacgattgctttgttcttgttgttggctgcagcatcc
gctgccggtgctaacattaatatcagaaagtacggagcccaggttaattcagatatcacc
ccggctttgacaaaagcttggaaagatgcgtgtcaaacaccgggtacgaacacagtggtg
atcccaaaagggacgtacaggttgggagcagtgcagtttatgggtccatgcaagggtcat
atcgagcttcaggttcgaggcattttattagccccaggcgaccgaggttacttcaagtct
ggtagttgggtcaattttcagaggatcgatggcttcactttgtctggcggtggaactttt
gatgccaaaggcaaacacgtttggggaaaaagatcttgttccggtattagatactgcggt
gaccttcccattagcttaaggttcgatttcatcaccaatggattgatcaaggacataaca
tcattggatagcaaacagttccacattaatttgttgggctgcaaaaacgttaccttccaa
aacgtaaatgtcatagcacccgatcatagtcccaacacagatggaatccatattgggcgg
tcaactggaatcaagattattgatacaaagattgcaaccggtgatgattgtatctctctt
ggtgatggcagtgagaatatacttatcaagggagtaacttgcgggcctggccatggaatc
agcgtaggaagtcttggtaagtacaaaaatgaagcgcctgtagttggagtcaacgttgtt
aactgcacattcataaatacacaaaatggcgtgagaatcaagacctggcctaactccttt
gccgggactgcttctgacatgcgtttcgagaatctcctcatgaagaatgtaagcacctct
atgctcatagatcaactatactgcccatggaatcaatgcaaagcgcagattccttcaaag
gttaagatcagcaacattagcttcaagaacatacgaggaacagctagtacaaaggatgtg
gtcaaactactttgtagcaagtcgtttccatgtcaagatgtgaaggtcactgacatagac
gtcagatacagtggaagagacgggccggctactttccaatgcgttaatatcaaacccacc
accagtggcagactgtatcctccaccttgcagttctcactaa
DBGET
integrated database retrieval system
