Carya illinoinensis (pecan): 122307895
Help
Entry
122307895 CDS
T08745
Name
(RefSeq) myosin-17-like
KO
K10357
myosin V
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122307895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122307895
04131 Membrane trafficking [BR:
cill04131
]
122307895
03029 Mitochondrial biogenesis [BR:
cill03029
]
122307895
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cill04812
]
122307895
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122307895
mRNA cycle factors
P-body specific factors
122307895
Membrane trafficking [BR:
cill04131
]
Others
Actin-binding proteins
Myosins
122307895
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122307895
Cytoskeleton proteins [BR:
cill04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122307895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
IQ_SCN5A_C
TMF_DNA_bd
AAA_22
nSTAND3
AAA_16
Zeta_toxin
TSC22
CbiA
Motif
Other DBs
NCBI-GeneID:
122307895
NCBI-ProteinID:
XP_042976953
LinkDB
All DBs
Position
4:complement(31920125..31940366)
Genome browser
AA seq
1531 aa
AA seq
DB search
MAGPDNIIVGSHVWVEEPSLAWIDGEVFQINGEEVHVQTTNGKTVVTDITKVFPKDTEAP
PGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQY
KGAAFGELSPHVFAVADAAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRS
GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAVRTYLLE
RSRVCQISNPERNYHCFYLLCAAPPEDREKYKLGNPKSFHYLNQSDCYELAAIDDADEYL
ATRRAMDVVGISEEEQEAIFRVVAAILHLGNIEFAKGDEADSSVIKDEQSRFHLNMTAEL
LNCDAKSLEDALIKRVMVTPEEVITRTLDAVAAVGSRDALAKTVYSRLFDWIVDKINNSI
GQDPNSKSLIGVLDIYGFESFKQNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKL
SRTSFTISHYAGEVLYLADLFLDKNKDYVVAEHQDLLTASKCSFVAGLFPRLPEESSKSS
KFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNVIQQLRCGGVLEAI
RISCAGYPTRRTFYEFLLRFGVLAPEVLDGNYDEKVACQMIMDKKGLKGYQIGKTKVFLR
AGQMAELDTRRAEVLGNAARIIQRQSRTYIARKEFLELRKAGIQLQSCLRGILARKLYEQ
LRREAAALMIQKNFRRYIIRKSYLTVRLSAITLQTGLRAMIARNEFRFRKQTKAAIIVQA
HLRGHVAYSYYKSLQKAALVSQCGWRQRVARRELRKLKMASRETGALKEAKDKLEKRVEE
LTWRLQLEKRLRTDLEEEKAQEIAKLQDALHAMQIQVEETNARIIHEREASRKSIEEAPP
VIKETPVIIQDMEKIDHLTAEMESLKALLLSERQTAEEARKACTDSETRNTELNKKLEDA
GQKVDQLQESLQRLEEKLSNSESENQVLRQQALALSPTGKALSARPKTMIIQRTPENGIV
LNGEAKVASDTTLAISNARGPESEEKPQKCLNEKQQENQDLLIKCISQDLGFSRGKPVSA
CVIYKCLLHWRSFEVERTSVFDRIIHTIASALEVPNNNDLLAYWLSNTSTLLFLLQHTLK
ASGAASLTPQRRRTATASLFGRVSQGLRASPQSAGLSSFLNGRGLGRLDDLRQVEAKYPA
LLFKQQLTAFLEKIYGMIRDNLKKEISPLLGLCIQAPRTLRVSLVKGRSQANAVAQQALI
AHWQRIVKSLNNFLKTMKANYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEY
VKAGLAELEQWCYEATEEYAGSAWDELKHIRQAVGFLVIHQKPKKTLNEITKELCPVLSI
QQLYRISTMYWDDKYGTHSVSSDVISSMRVMMTEDSSNAVSSSFLLDDDSSIPFSVDDIS
KSMQQVDIADIDPPPLISENSGFGFLLPRAE
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atggctggaccagataacatcattgtgggttcccacgtatgggttgaagagccatcactg
gcatggattgatggagaagtcttccaaatcaatggtgaagaagttcatgtgcagaccaca
aatgggaaaaccgttgtcacggatatcacgaaagtatttccaaaggataccgaggcccct
cctggaggtgtagatgacatgacaaagctttcttatttacatgaaccgggagttctgcac
aacttagcaactcgatatgaacttaatgaaatttatacatacaccggaaatatcctgatt
gctgtaaatccttttcaaagattaccacatttatacgatactcacatgatggaacaatat
aaaggagctgcatttggagagctaagtcctcatgtttttgcagttgccgatgctgcatac
agggcaatgatcaatgaggggaaaagcaactcaattctagttagtggagagagtggtgct
ggtaagactgagacaacaaagatgcttatgcgatatcttgcataccttggtggtcgatct
ggagtagaaggtcggacggttgaacaacaagtcctagaatccaatccagttcttgaagca
tttggcaatgccaaaactgttagaaacaataactcaagtcgttttggtaaatttgttgag
atccaatttgacaagagcgggaggatatctggggctgctgtacgaacttatttgcttgaa
aggtctcgtgtttgccaaatttcaaatcctgaaagaaactaccattgcttttaccttctt
tgtgcggcaccacctgaggacagagagaagtataagttgggaaaccctaagtcattccac
tacttgaatcaatccgactgttatgagctggctgcaatagatgatgcagatgagtatctt
gccaccagaagggctatggatgtagttggaatcagcgaggaagagcaggaggccattttt
agggttgtagctgcaatcctgcatcttggaaatattgaatttgcaaagggagacgaggct
gactcttctgtcattaaagatgagcagtctagattccatctgaatatgacagctgagctg
cttaattgtgatgctaagagcttggaagatgcactgattaagcgtgtaatggtgacacca
gaagaagttattacaagaactcttgatgctgttgctgcagtgggtagcagggatgcatta
gctaaaaccgtctactctcgtttgtttgattggattgtggataaaatcaacaattcaatt
gggcaagatccaaactcaaaatcattaattggagttcttgatatttatgggtttgagagt
tttaagcagaatagttttgagcagttttgtatcaactttacaaatgagaaactgcaacaa
catttcaatcagcatgtcttcaaaatggaacaagaggagtatacgaaagaagaaatcaat
tggagctacatagagtttgttgataaccaagatgttttggatctgattgagaagaaacca
ggaggaattattgcacttctggatgaagcctgcatgtttcccaaatccacacatgaaaca
tttgctcagaagttgtatcagacattcaaaaacaacaagcgctttatcaagcctaagctt
tctcgtactagttttaccatatctcactatgcaggagaggtactttatctggctgatttg
ttccttgataaaaacaaagattatgtcgtggctgaacatcaggatctgttgacggcgtca
aagtgctcttttgtggcaggcctatttcctcgacttcctgaggaatcatcaaagtcatcc
aaattttcttccattggctctcgctttaagttacaacttcaatctttgatggagaccttg
agttccacagaaccccattacatcagatgtgtaaagccaaacaatgtcctcaagcccgct
atttttgagaacctgaatgttatccaacaattacgatgcggtggtgttcttgaggcaatc
agaatcagctgtgctggatatcctacacgacgaacattttatgagtttcttctccgcttt
ggcgttcttgctcctgaagttttggatgggaactacgatgagaaagttgcgtgccaaatg
attatggacaagaaaggattgaaaggttatcagataggcaagacaaaagttttcctacga
gctggtcagatggctgagttggacacaagaagagcagaggtgcttggaaatgccgctaga
atcattcaaagacaaagtcgtacatatattgcacgcaaagagttccttgaattacgtaaa
gctgggattcaattgcagtcatgtttacgaggtatattggctcggaaactctatgagcaa
ttacgtcgagaagcagcagctctgatgattcagaagaacttccgacgatacattatccgg
aaatcatacttaacagtacggttgtctgcaatcacattgcagacagggttaagggcaatg
attgctcgcaatgaattcagattcagaaaacaaacgaaggcggcaattattgtccaggct
catttacgtggccacgtagcatattcctattataagagtctccagaaggctgcactagtt
tctcagtgtggttggaggcaaagggttgcccggagagagctcaggaagctcaaaatggct
tcaagagaaactggggcccttaaagaagcgaaagacaaactagaaaagcgtgtggaagaa
ctgacatggcgtttgcagcttgagaagagattaaggactgacttggaagaggaaaaggcc
caggaaattgcaaagttacaggatgctttgcatgcaatgcaaatacaagtagaagaaaca
aatgccaggattatccatgaacgagaagcatctcggaaatctattgaagaagcacctcca
gtcattaaggagactcctgttataatccaagatatggaaaagattgatcatttgactgct
gagatggagagtttaaaggccttgctactatcagaaaggcagacggcagaggaagcgagg
aaagcttgcacagattctgagactagaaatacagaactgaacaaaaaacttgaagatgca
gggcaaaaagtggatcaacttcaggagtctttgcaaaggttagaagagaaactttccaat
tctgagtccgagaatcaagtacttcgacagcaggcactagccttgtcaccaactggaaaa
gctttgtctgcaagaccaaagactatgattattcagagaacacctgagaatgggattgtt
ctaaatggagaagccaaggttgcatcagatacaacccttgctatatcaaatgcacgtggg
cctgaatcggaggaaaaaccacagaaatgtcttaatgagaagcagcaggagaaccaggac
cttctgatcaaatgtatatctcaagatttaggattttctcggggcaaacctgtttctgct
tgtgtcatatacaaatgccttctgcactggaggtcatttgaggttgaaagaactagtgtt
tttgatcgtatcattcataccatagcttcagcattagaggtcccgaataataatgatcta
ttagcttattggttatcaaatacatcaactttattgtttctgctccaacacaccctaaaa
gcaagtggagctgctagcttgactccacaacggcggagaactgcaacggcttctcttttt
ggaagagtgtctcaggggttacgggcatctcctcaaagtgcagggctctcttcatttctt
aatggtcgagggcttggtagacttgatgacttgaggcaagtggaggcaaagtatccggct
ttattgtttaagcagcaacttactgccttccttgagaagatatatggaatgataagagac
aatctaaagaaagagatctctccattacttggattatgtatccaggcacccaggacatta
cgggtgagtttagtgaaaggacgttcccaagctaatgccgttgctcagcaagctttaatt
gcccattggcagcgcattgttaaaagcttaaacaattttttgaagacaatgaaagcaaac
tatgtgcccccattcttagtccgtaaagtgttcactcagatattctcattcatcaatgtt
cagctattcaacagtcttcttttgcggcgtgagtgttgttcattcagtaatggggagtat
gtaaaagcgggtctggctgaattagaacaatggtgctatgaggctaccgaggaatatgca
ggctcagcttgggatgaactaaagcatattaggcaggctgttggattcctagtcatacat
caaaaaccgaagaagactttgaatgaaataacaaaggaactttgtcctgtgctcagcata
cagcagttatacaggattagtacaatgtactgggatgacaaatatggcacacacagcgta
tcttcagatgttatttctagcatgagagttatgatgactgaggattctagcaatgctgtt
agtagttcatttctattagatgatgactcaagcattcccttttctgttgatgacatctcc
aagtcaatgcaacaagtagatatagctgacatcgatcctcctcccttaattagtgaaaac
tcggggtttgggtttttacttccacgtgcagagtga
DBGET
integrated database retrieval system
