Carya illinoinensis (pecan): 122308049
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Entry
122308049 CDS
T08745
Name
(RefSeq) structural maintenance of chromosomes protein 2-1-like isoform X1
KO
K06674
structural maintenance of chromosome 2
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122308049
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
122308049
Condensin II
122308049
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
PspA_IM30
AAA_13
AAA_29
KIF9
bPH_2
Ribosomal_S15
Spike_torovirin
Motif
Other DBs
NCBI-GeneID:
122308049
NCBI-ProteinID:
XP_042977142
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Position
4:complement(5766049..5777827)
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AA seq
1183 aa
AA seq
DB search
MYIKEICLEGFKSYATRTVVPGFDPYFNAITGLNGSGKSNILDSICFVLGITNLQQVRAS
NLQELVYKQGQAGITKATVSVVFDNSDRSRSPLGYEDHPEITVTRQIVVGGRNKYLINGK
LAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPETLSMLEEAAGTRMYETKKES
ALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLKRFCIAYEYA
QAERIRDNAVCEVEQVKASIAEVDDDTGRTQEQIQEMEAKISKLTAEKEASMGAEVKSLS
EKVDAFSQDLVRQVSVLNNKEDTLRSEKESAEKISSNIEDLNHSVEAKASAVRKAEEGAA
DLKKRVEELSKNLDEYESDYQGVLAGKSSGNEEKCLEDQLSDAKISVGSAETELKQLKTK
ISHCEKELKEKKHQLMSKREEAVAVESELNDRIMDVENIKKALESLSYKEGQMEALQKDR
ASDLERVQKLKDEIRNLSAQLANFDFSYRDPVKNFDRSKVKGVVAKLIKVKDSSTMTALE
VTAGGKLFNVVVDTENTGKQILQNGALRRRVTIIPLNKIQSHTVSPRVQNAAVRLVGKEN
AELALSLVGYEEEVKTAMEYVFGSTFICKTIDAAKEVAFNNEIRTPSVTLEGDIFQPSGL
LTGGSRKGGGDFLRQLHDLAEADSELSTHQKKLAEIETQIAELRPLQKKFMDLKAQLELK
SYDLKLFQGRAEQNEHHKLSELVKRIEQELEETKSMAKEKQLLYENCVNTVSLLEKSIKE
HDNNREGRLKDLEKKIKMIKSQTQSSSKALKGHENEKERLVMEMEAVVEERASLETQLAC
LREQIDSLTAEVEEHKLRVAATRNNHEQAQSELDLIRLKMKECDSQISCILKEQQKLQHK
LSEINLQRKKMENEVKRMEMEQKDCSTKVDKLIEKHAWITSEKQLFGRCGTDYDFSSCDP
FKAREELERLQAEQSGLEKRVNKKVMAMFEKAEDEYNELMSKKNIIENDKSKIKKVIEEL
DEKKKETLKVTWVKVNRSLFICFSDFGSIFSTLLPGTSAKLEPPEGCSFLDGLEVRVAFG
GVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHF
PHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVASKQSK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaaggagatatgcttagaagggtttaagtcctacgcgacgagaaccgtagtc
cctggcttcgatccatacttcaacgcgattaccgggctgaacggttcgggtaagtcgaac
attctcgactcaatttgcttcgtgctggggatcaccaatttgcagcaggttagggcctcg
aatcttcaggagctcgtgtacaagcaaggccaagccgggattaccaaggccactgtctcc
gtcgtgtttgataactccgacaggagccgtagcccccttggatacgaggaccatcccgaa
atcactgtcactcgacagattgtggttggtggaaggaacaagtacctaattaatggaaaa
ctcgcccagcctagtcaggttcagaatcttttccattcagtgcagcttaacgttaacaat
ccacatttccttataatgcaagggcgtattaccaaggttttaaatatgaaaccccctgag
actctgtctatgctcgaagaagccgctgggacaagaatgtacgagacaaagaaagagtct
gcattgaaaacacttgagaagaagcagagtaaggttgacgagattaacaagcttcttgac
caggaaatactgcctgctttggagaagttgaggaaagaacggacccagtacatgcaatgg
gctaatggcaatgctgagttggatcgactcaaaaggttttgcattgcttacgaatatgct
caagcagagaggataagagataatgcagtctgtgaggtggaacaggtgaaggccagtatt
gctgaggttgatgatgatacgggaaggacgcaagaacaaatacaagagatggaggctaaa
atatcaaaactgactgctgaaaaagaagcaagtatgggtgcagaagttaaatctttgtcg
gagaaagtagatgcattttctcaagatcttgtaaggcaagtgtctgtactgaacaataaa
gaggacactcttcgaagtgaaaaagaaagtgctgaaaagatttctagtaatattgaagat
ttgaatcattctgtggaagcgaaggcctctgctgttagaaaggctgaagaaggagctgcc
gatcttaaaaagagagttgaggaactttctaagaatttggatgagtatgaaagtgattac
cagggtgtgttagctggaaaaagcagtggaaatgaggagaaatgccttgaggatcaacta
agtgatgctaagatttctgttgggagtgctgaaactgaattaaaacagttgaaaacaaaa
ataagccattgcgagaaggagttgaaagagaaaaagcatcagttaatgtcgaagcgtgaa
gaagctgttgcggttgagagtgaacttaatgatagaataatggatgtggagaatataaaa
aaggcattggagtctctctcctataaggagggacagatggaagctttacaaaaggatcgt
gcatcggacttggagcgggtgcagaagttgaaagatgaaatacgtaatctttcagcacaa
ttagcaaattttgatttctcttaccgtgaccctgtgaagaattttgataggtcaaaggta
aaaggcgttgttgcaaaacttatcaaagtaaaggatagctctacaatgactgccttagag
gttactgctggtggaaagctatttaatgttgttgtggacacagaaaatactggaaagcaa
attcttcagaatggcgctcttagaagaagagtgacaattatacctttgaataagatacag
tcccatacagtttcccctagagttcagaatgctgctgttagattggttggcaaggagaat
gcagaactggcactttctttggttggttatgaggaagaagtgaagactgctatggaatat
gtatttggttcaaccttcatttgcaagaccattgatgctgcaaaggaggttgcatttaat
aatgaaattcgaaccccaagtgtcactcttgaaggggatatatttcagccaagtggtctt
ttgaccggtggaagtcgcaagggtggtggtgatttcttaaggcaacttcatgatttggca
gaggctgattcagaactttctacacatcagaaaaagttggctgaaattgaaacacagatt
gcagagctccggcctcttcagaaaaagttcatggacctcaaagcacagctagagcttaaa
tcatatgaccttaaactgtttcagggcagggctgagcaaaatgagcatcataagctcagt
gaattagtcaagaggattgagcaggagcttgaagaaacaaaatctatggctaaagaaaag
caacttttgtatgaaaactgtgttaatacagtttcattgcttgagaaatctatcaaagag
catgataataatcgggagggcaggctcaaggatttggagaaaaagattaagatgataaaa
tctcaaacgcagtcatcttcaaaagctctcaaggggcatgaaaatgagaaggagaggctt
gttatggaaatggaagctgttgtagaggaacgtgcatccttagagactcaactagcttgt
ttgagagaacaaattgatagtcttactgctgaagtagaggaacataaattgagggttgct
gccacaaggaataatcatgaacaggctcaatcggagcttgatttgatccgtttgaaaatg
aaggaatgtgactcccagattagttgtattcttaaggagcagcagaaacttcagcataaa
cttagtgagattaatcttcagaggaaaaagatggaaaatgaggtaaaaagaatggagatg
gaacaaaaagattgctctacaaaagtagacaaactgatagagaagcatgcatggattaca
tctgagaaacaattatttggaagatgcggaactgattatgatttttcatcttgtgatcct
tttaaggcaagggaagaacttgagcgactgcaggcagaacaatcaggccttgagaaaagg
gtgaacaagaaagtgatggcaatgtttgagaaagcagaagacgagtacaatgaattgatg
tcaaagaaaaacatcattgagaatgacaagtcgaaaatcaagaaggtcatagaagagcta
gatgagaaaaagaaggaaacgctaaaagttacttgggttaaagttaacagaagtttgttc
atttgcttcagtgatttcggatctatcttttccaccctgttaccgggaacctcggcaaag
ctagaacctccagaaggatgcagcttccttgatggtcttgaggttcgtgtagcatttgga
ggtgtttggaaacaatccctgtcagaacttagtggaggccaaagatctttgcttgcactt
tctcttatcttggcactactcctttttaaaccagctccgctttacatattggatgaggtt
gatgcagctcttgatctaagccacactcagaacatagggcgaatgattaaagctcacttc
ccacactcccagtttattgtggtctcactgaaagaaggcatgttcaataatgctaatgtc
cttttccggacaaaatttgtggatggtgtttccacagttcagaggactgttgcatctaag
cagagcaagtga
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